Peromyscus maniculatus bairdii (prairie deer mouse): 102925373
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Entry
102925373 CDS
T11302
Symbol
Fip1l1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102925373 (Fip1l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmav03019
]
102925373 (Fip1l1)
Messenger RNA biogenesis [BR:
pmav03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
102925373 (Fip1l1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
102925373
NCBI-ProteinID:
XP_006979774
Ensembl:
ENSPEMG00000002025
LinkDB
All DBs
Position
10:69819675..69887409
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AA seq
604 aa
AA seq
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MSAGEVERLVELSSGTGGDEEEEWLYGGPWDVHVHSDLAKDLDENGVERPEEENTSANPP
AGIEEETAENGVSKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNLN
IKAGGRVYGNTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFN
EDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDGRFNLFKVQQGRT
GNSEKEAALPSTKAEFTSPPSLFKTGLPPSRNSTSSQSQTSTASRKASSSVGKWQDRYGR
AESPDLRRLPGAIDVIGQTITISRVEGRRRANENSNIQVLSDRSATEVDNNFSKPPPFFP
PGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIESGH
SSGYDSRSARAFPYGNVAFPHLTSSAPSWPSLVDTTKQWDYYARREKDRDRDRERDRDRE
RDRDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRE
RRHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPVPEQESAEA
APAE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtcgagcgcctggtggagctgagcagcgggaccggcggggatgag
gaggaagagtggctgtatggcggcccatgggacgtgcatgtgcacagtgatttggcaaag
gatctagatgagaatggagttgaaaggccagaagaagaaaataccagtgctaatcctcca
gctggaattgaagaggaaactgctgaaaatggcgtgtcaaaaccgaaagtgacggagact
gaagatgacagtgacagtgacagtgacgatgatgaggatgatgttcatgtcactatagga
gacattaaaacgggagcaccgcagtatgggagttatggaacagcaccagtaaatcttaat
atcaaggcagggggaagagtatatggaaatacaggaaccaaagtcaaaggggtagacctt
gatgcccctggcagcattaatggagtgccactcttggaagtggatttggattcttttgaa
gataaaccatggcggaaacctggtgctgatctttctgattattttaattatggctttaat
gaagatacttggaaagcttactgtgaaaaacaaaagaggatacgaatgggacttgaagtt
ataccggttacttcaacaacaaataaaattacggccgaagactgtactatggaagttaca
ccaggtgcagagatccaagatggcagattcaatctttttaaggtacagcaagggagaact
ggaaattcagagaaagaagcagcgcttccatctacaaaagcagagtttacttctccgccc
tcgttgttcaagactggcctgccaccaagcagaaacagcacctcttctcagtctcagaca
agtactgcctccagaaaagccagttcaagcgttgggaagtggcaggatcgatatgggagg
gccgagtcacccgacctaaggagattacctggtgcaattgatgtcattggtcagacaata
accatcagccgagtagaaggaagacgccgggccaatgagaacagcaatatacaggtcctt
tctgacagatctgctactgaagtcgacaacaatttcagcaaaccacctccatttttccct
ccaggggctcctcctactcaccttccacctcctccatttctcccacctcctcccactgtc
agcactgccccacctctgatcccacctccaggtattccaataactgtaccacctccaggt
ttcccccctcccccaggcgctccacctccatctctcataccaacaatcgaaagtggccat
tcctctggttacgacagccgttctgcgcgagcttttccatatggcaatgtggccttcccc
catctcaccagctccgctccctcgtggcctagcctcgtggacaccaccaagcagtgggac
tattatgcacggagagagaaagaccgagacagagaccgagagagagaccgagaccgagag
agagacagagaccgggacagagaaagagagcgcacccgagagagggagagggagcgggat
cacagccccacccccagcgttttcaacagtgatgaggagcgctacagataccgggagtat
gccgagagaggctatgagcgccacagagctagtcgggagaaagaagaacgacacagagag
cgacgtcacagagagaaagaggagaccagacacaagtcctctcgcagtaacagtagacgt
cgtcatgaaagtgaagaaggggacagtcacaggagacacaagcacaaaaagtctaaaaga
agcaaagaaggaaaagaggctggcagtgagcccgtccccgaacaggagagcgccgaagct
gcccctgccgagtag
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