Peromyscus maniculatus bairdii (prairie deer mouse): 102925394
Help
Entry
102925394 CDS
T11302
Symbol
Ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmav03400
]
102925394 (Ascc3)
Enzymes [BR:
pmav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
102925394 (Ascc3)
DNA repair and recombination proteins [BR:
pmav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
102925394 (Ascc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
ASCC3_N
WHD_SNRNP200
ResIII
Helicase_C
AAA_22
Helicase_PWI
AAA_19
AAA_30
T2SSE
TPR_IFT122
Motif
Other DBs
NCBI-GeneID:
102925394
NCBI-ProteinID:
XP_006983804
Ensembl:
ENSPEMG00000015319
LinkDB
All DBs
Position
16:complement(3183511..3507220)
Genome browser
AA seq
2202 aa
AA seq
DB search
MALPRLTGALRSFSNVTKQDNYNEEVADLKMKRSKLHEQVLDLGLTWKKIVKFLNEKLEK
NKMQSINEDLKDILQAAKQIVGTDNGREAIESGAAFLFMTFHLTDSVGHTETKAIRQMFG
PFPSSSATAACNATNRIISHFSQDDLTALVQMAEDECSDVVFFGKNLAFSFDMHDLDHFD
ELPINGEAQKTISLDYKKFLNEHFQEHYTPELKPVEKTNGSFLWCEVEKYLNATLKEMTE
APRIEDLCCTLYDMLASVKSGDELQDELFELLGPEGLDLIEKLLQNRITIVDRFLNSSTD
YKFQALQDSCKKILGENTKPNYGCQVTIQSEQEKQLMKQFRREEKRIARREKKAGEDGEV
PGEGLLSFDPKELRIHREQALLNARNAPILGRQRDMEVEKIRYPHVYDSQAEARETSAFI
AGAKMILPEGIQRENTKLYEEVRIPYSEPMPVGFEEKPVYIQDLDEIGQVAFKGMKRLNR
IQSIVFETAYNTNENMLICAPTGAGKTNIAMLTVLHEIRQHFQQGVIKKNEFKIVYVAPM
KALAAEMTNYFSKRLEPLGIVVKELTGDMQLSKSEILRTQMLVTTPEKWDVVTRKSVGDV
GLSQIVKLLILDEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVAT
FLHVNPYIGLFYFDGRFRPVPLGQTFLGIKSANKMQQLNNMDEVCYESVWKQVKAGHQVM
VFVHARNATVRTAMSLIERAKNSGQISYFLPTQGPEYGHALKQVQKSRNKQVRELFSEGF
SIHHAGMLRQDRSLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFV
DLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLSHYLTLLTQQNPIESQFLESLADNLN
AEIALGTVTTVEEAVKWISYTYLYVRMRANPLAYGISHKAYQIDPTLRKHREQLVIEVGQ
KLDKAKMIRFEERTGYFSSTDLGRTASHYYIKYNTIETFNELFDAHKTEGDIFAIVSKAE
EFDQIKVREEEVEELDTLLNNFCELSAPGGVENSYGKINILLQTYISRGEMDSFSLISDS
AYVAQNAARIVRALFEIALRKRWPTMTYRLLNLSKVIDKRLWGWASPLRQFSVLPPHILT
RLEEKNLTVDKLKDMRKDEIGHILHHVNIGLKVKQCVHQIPSVTMEASIQPITRTVLRVS
LSIHPDFSWNDQVHGTVGEPWWIWVEDPTNDHIYHSEYFLALKKQVINKEPQLLVFTIPI
FEPLPSQYYIRAVSDRWLGAEAVCIINFQHLILPERHPPHTELLDLQPLPVTALGCKAYE
ALYNFSHFNPVQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFNKYPTSKAVYIA
PLKALVRERMDDWKIRIEEKLGKKVIELTGDVTPDMKSIAQADLIVTTPEKWDGVSRSWQ
NRNYVQQVTILIIDEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDL
ADWLNIKQMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPAFQAIRSHSPAKPVL
IFVSSRRQTRLTALELIAFLATEEDPKQWLNMDEQEMDNIIGTIRDSNLKLTLAFGIGMH
HAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYDGKTRRYVDFP
ITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLSDHLNAEI
AGGTITSKQDAMDYITWTYFFRRLIMNPSYYNLGDVSQDSMNKFLSHLIEKSLVELELSH
CIEVGEDNRSIEPLACGRIASYYYLKHKTVKMFKDRLNPECSTEELLSILSDAEEYTDLP
VRHNEDHTNSELAKCLPIELNPHSFDSPHTKAHLLLQAHLSRAMLPCPDYDTDTKTVLDQ
ALRVCQAMLDVAASQGWLVTALNITHLVQMVIQGRWLTDSSLLTIPNIEQHHLHLFRKWK
PPLKGPHAKCRTSIECLPELIHACEGKDYVFSSMVENELQSAKAKQAWNFLSRLPVINVG
ISVKGSSDGLVEGHNELSISTLTADKRDDNKWIKLHADQEYVLQVSLQRVHFESHKGKHE
SYAVTPRFPKLKDEGWLLILGEVDKRELIALKRVGFVRTHHDASLSFFTPETPGRYIFTL
YLMSDCYLGLDQQYDIYLNVTKADISTQVNTKVSDAFTDLAV
NT seq
6609 nt
NT seq
+upstream
nt +downstream
nt
atggctttacctcgactcacaggagccttgcgctccttttcaaatgtcaccaagcaagat
aattataatgaagaagtagctgacttaaagatgaagcgatccaagcttcatgaacaggtt
ttagatttgggcctcacatggaagaagatagtcaaatttttgaatgaaaaactagagaag
aataaaatgcaaagtataaatgaagacttaaaagatatactgcaagctgcaaaacagatt
gttggaacagataatggaagagaagcaattgaaagtggagctgcatttctctttatgaca
tttcacttgacggactctgttggtcacacggagacaaaagccatcagacagatgtttggt
ccctttccatcgtcatctgctactgcagcttgtaatgccactaatcgaattatttctcat
tttagtcaggatgatctgactgctcttgtccagatggcagaagatgaatgtagtgatgta
gtgttttttggtaaaaacttagcattttcctttgacatgcatgatctggaccactttgat
gaattgccaataaatggtgaagcccagaaaactatcagcttagattataagaagttcctg
aatgaacattttcaggagcactacaccccagaactcaagccagtggaaaaaacaaatggt
tcctttttgtggtgtgaagttgagaagtacttgaatgcaactttaaaggaaatgactgaa
gcaccgagaattgaagatctttgctgtaccttatatgacatgcttgcttctgttaaaagc
ggtgatgaactacaggatgagctttttgaattgctgggacctgaaggacttgatctgatt
gagaagctcctccagaacagaattacaattgtagatcgatttcttaattcctcaactgat
tataagtttcaggctcttcaagatagttgtaaaaaaattttaggagagaatactaagcct
aattatggatgtcaagttactattcaatctgaacaagaaaaacagttaatgaaacaattt
cgccgtgaagaaaagagaattgccagacgagaaaaaaaggctggagaagacggcgaagtt
cctggggaaggacttttgtcctttgatcctaaggaactccggatacacagagaacaggca
cttctgaatgctagaaatgctccaattctgggcaggcagcgagacatggaggttgaaaaa
atccgttatccccacgtttatgattcccaggctgaggcccgagaaacatcagcatttatt
gctggtgccaagatgattttaccagaaggaattcaaagagagaataccaagttatacgaa
gaagtacggatcccttatagtgaacccatgccagttggctttgaggaaaagccagtttat
atccaagatttggatgagattggacaggtggcttttaaaggaatgaagagactcaataga
atccagtccatagtatttgagactgcttataacaccaatgagaacatgctgatttgtgcc
cctactggagctgggaagaccaacattgcgatgcttacagttttacatgaaatccgacaa
cactttcaacaaggtgttattaaaaagaatgagtttaagattgtgtatgttgctccaatg
aaagccttggcagcggaaatgacaaattacttcagcaaacgtctagagccactgggcatt
gtagtgaaagaattgactggagatatgcagttgtcaaaaagtgaaattttacgaactcag
atgcttgtgaccacaccagaaaaatgggatgtagtaacaagaaagagtgttggtgatgtt
ggtctttctcaaattgtaaaactcctgattcttgatgaagttcacttgcttcatgaagac
cggggcccagttctggaaagcatagttgcaaggaccttacgacaggttgaatccacacag
agtatgataagaattctcgggctgtctgcaaccttacccaactaccttgatgttgctaca
tttttgcatgttaacccttacattggacttttttattttgatggccgttttcgaccggta
cctcttggacagacattcctaggtattaaaagtgcaaataagatgcaacagttgaataac
atggatgaagtgtgctatgaaagcgtttggaaacaagtaaaggctggacaccaggttatg
gtgtttgtacatgctcgcaatgccaccgtacgaacagccatgtctctaatagaaagagca
aaaaatagtggccagatttcctactttctgcctacccaaggaccagagtatggacatgcg
ttaaagcaggtacaaaagtcaagaaataagcaagtacgagaattattctctgaaggcttt
agcattcatcatgcagggatgcttcggcaagacaggagtttggttgaaaacttgttttca
aatgggcacatcaaagtccttgtctgtacagccaccttagcctggggtgtcaatcttcct
gcgcatgccgttattattaagggaacacaaatatatgctgccaaaagaggctcctttgtt
gaccttggaattttagatgtcatgcagatatttggccgagctggacgaccacaatttgac
aaatttggggaaggaatcattataacaacacatgataaactcagccattacctcacttta
ctcactcaacaaaacccaattgagagtcagtttctggaaagccttgcagataacctaaat
gcagagattgctctaggaacagttaccactgtcgaagaagcagtgaagtggataagctac
acttatctgtatgtgcggatgagagcaaatccattagcatatggcatcagtcataaggca
taccagattgacccaacattaagaaaacatcgagaacagctggtcattgaagttggacaa
aagctggataaggctaagatgattcgttttgaagagcgaactggttatttttcctccact
gatttgggtagaactgccagccactactatattaaatacaacaccattgagacatttaat
gaactctttgatgcacataaaacagaaggtgatatctttgctattgtctccaaagctgaa
gaatttgatcaaattaaggtcagagaagaggaagtagaggagctagataccttgttaaac
aatttctgtgaactctcagctcctggaggtgtggaaaatagttacgggaaaataaacatc
ctgcttcagacctacattagccgaggagagatggacagtttctcccttatatcagattct
gcatacgttgcccagaatgcagctagaattgtccgtgctctctttgaaattgcactgagg
aaacgttggcctaccatgacctacaggcttctgaatcttagtaaagtcatcgacaagaga
ctatggggttgggctagccctttgagacaattttctgtgttaccaccacacattctaaca
agattagaagaaaaaaacctcactgtggataaactcaaagacatgagaaaggatgaaata
ggtcacattttgcatcatgtgaatattggactgaaggttaaacaatgtgttcatcagatc
ccttctgttacaatggaagcttccattcagcccatcacacggactgtcctccgagtgtca
ctgagtatccacccggatttctcttggaatgatcaggtccatggaacagtaggggaacca
tggtggatttgggtagaagatcctacaaatgaccatatttatcactcagagtacttctta
gctcttaaaaaacaggttattaataaagaacctcaactgctggtattcacaatccctatt
tttgagcctttgccctctcagtactacattcgagcagtgtctgatagatggctaggagct
gaggctgtttgcattatcaattttcaacatctgattctaccagagagacatcctccccat
acagaattgttggaccttcagcctttaccagtcacagctttggggtgcaaagcatatgaa
gctctatataacttcagccacttcaacccagtacagacacaaatattccacacactatat
cacacagactgtaatgtcctgcttggagcccccactggttcaggaaagacggttgcagct
gaattagccattttcagagtcttcaacaagtatcccacttcaaaggcagtgtatattgct
cccctaaaagctctagtgcgtgaaaggatggatgactggaaaattagaatagaagaaaaa
cttggtaaaaaagttattgaactgacaggggatgtgaccccagacatgaaatccattgct
caggctgaccttattgtcacaacaccagaaaagtgggatggagtcagtcgaagctggcag
aataggaactacgttcaacaggttactattctcatcatagatgagatccatctgcttggg
gaggagagaggtccagttctggaggtcattgtatctcgaacaaactttatttcatcacac
acagagaagcctgttagaatagttggactgtccactgcattagctaatgccagagacctt
gctgactggctcaacattaagcagatgggtttgttcaacttccgaccatcagttcgccca
gttcctctagaagtccacattcaaggtttcccaggtcaacattactgcccacgcatggct
agtatgaataagcctgcatttcaggcaattagaagtcattctccagccaaacctgttttg
atatttgtctcatcaagacgtcaaactcgacttactgctttagagttgatagcttttctg
gctactgaagaagacccaaaacagtggttgaatatggatgagcaagagatggacaatatc
attgggacaatacgagattccaacctgaagctgactctagcttttgggataggaatgcat
catgctggactgcatgaaagagaccgaaaaactgtagaagagctgtttgtgaactgtaaa
gttcaggttctcattgctacaagcacattagcatggggtgtaaactttccagctcactta
gtaattattaaaggaactgaatattatgatggaaaaacaagacgttatgtggattttccc
atcacagatgtgctgcagatgatgggacgagctgggagacctcagtttgatgaccagggc
aaagctgtaattcttgttcatgacataaaaaaagatttttataaaaaatttctttatgaa
cctttcccagtagaatcaagcttattaggagtgctttctgaccacttaaatgcagagatt
gctggaggtacaataacatctaagcaagatgcaatggattatatcacatggacttacttt
ttccgacgtctcatcatgaaccctagctactacaacttgggcgacgtcagccaggactcc
atgaacaagttcctgtcacatctgatcgagaagtctctggttgagttggagctttcccac
tgcattgaagttggagaggataaccgcagcatagagccactagcatgtggccgaattgcc
tcctattactatttgaagcacaaaacagtcaaaatgttcaaggaccgtttgaatcctgag
tgcagcactgaagaattgctttcaattttgagtgatgcagaagaatacacagacttgcca
gtaagacacaatgaggaccatacaaacagcgaattggccaaatgtcttcccattgaatta
aatcctcattcatttgacagtcctcacaccaaagcgcatctcttgcttcaggcacatctc
agccgagctatgctgccctgccctgattatgacactgataccaaaacggtcttagaccaa
gctctcagagtatgtcaggccatgctggatgtggctgcaagccagggctggctggtaact
gccctgaacatcacccacctggttcagatggtgatccaaggccgatggctaacggactcc
tctcttctcacaataccaaacatagagcagcaccatcttcaccttttcaggaaatggaaa
ccacccttaaagggcccacatgctaaatgccgaacatccattgagtgccttcctgagctg
atccatgcctgtgaagggaaagactatgtattcagctccatggtggagaatgagttacag
tcagcaaaagcaaagcaggcatggaatttcttgtctcgcctgccagtgataaatgttggc
ataagtgtcaaaggctcatcggatggcttagttgaaggacataatgaactctccatctca
acgctgacagcagacaaacgagatgacaacaaatggatcaagttgcatgccgatcaggag
tatgtgcttcaagtcagcctgcagagagtccactttgagtcccacaagggaaaacacgag
agttatgcagttaccccccgatttcccaaattaaaagatgaaggatggcttttgatctta
ggagaggtggataaaagagagctgattgctttaaaacgagtaggatttgttcgaactcat
catgatgcctcgctctctttctttactcctgaaacacctggaagatatatcttcaccctg
tatctaatgagtgactgttacctcggcctagaccagcagtatgacatttatctcaatgtc
acaaaagcagacatttccacacaggtcaatacaaaggtctccgatgccttcactgacttg
gcagtatag
DBGET
integrated database retrieval system
