Peromyscus maniculatus bairdii (prairie deer mouse): 102925501
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Entry
102925501 CDS
T11302
Symbol
Sh3tc1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmav04131
]
102925501 (Sh3tc1)
Membrane trafficking [BR:
pmav04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
102925501 (Sh3tc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_7
TPR_NPHP3
SH3_1
TPR_1
SH3_2
TPR_2
SH3_9
TPR_MalT
3HB_CusB
Csd3_N
TPR_19
TPR_14
Motif
Other DBs
NCBI-GeneID:
102925501
NCBI-ProteinID:
XP_006985647
Ensembl:
ENSPEMG00000015098
UniProt:
A0A6J0DUA1
LinkDB
All DBs
Position
10:3188633..3235266
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AA seq
1344 aa
AA seq
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MRSSREEEVTSEELATMGRGSDEPPGGCSHGDQIHSVSVSLPTGQERAGPEEAEAAVRGD
VAPPPSIAELAAETTSSQVAVYPTDLTLQLLAVRRKSGLRSPSLQQALRSRLRLLENDSR
EVARVLGELSARLLSIHSDQDRIVVTFKTFEEIWKFSTYHALGFTHHCLENLLVDQTFWL
LSPSEEEETAILMYVNKDALKQTHKSLLAQEGPFFVLCPDQRVRMMMGPQGAGKGPQALR
RASGVPLGMAVLGTDSSSSTPSTSSKVEAAEAEPEPLTPFHQWTLRVPWDPIDESMDGPG
TPGAQLMGFGLASAVADFQGSGPEEISFCVGDVIEVIGAQVPGLPWCVGRHVASGQVGFV
RTGLVSMQGSASDLESAVFLSEEERSFFSSEGHFSDEDARRLLSRTSGTDVCTTCSLDWL
EEAEAEQLEQREMSLHHPNPEPHETLHMVKDVLERCKACPDYPEDPVSWSLGAVSSRVST
PDTEDPPFCLDPEDDWTDPEPPDSLLQVLNAPGYEAHFRGLYDISLPWLGTALCGFDDEE
ELAGCLAQARGVAKKVNLGMALARLCLLLGRLCARKLKLSQARVYFEEALGALEGTFGDL
SLVAAVYTSLATVYLKQKNGEKCVQVAPKAAALLLGTPGHAYSTDAELLKYALRRAICGL
SPQAEARACFLLARHYTHLKQPEEALPYLERLLRLNRDVGTPQASWPEDCYLLLADIYGR
KCLPHLALSCLRVSSLWTRCSLAGSLRSVDLVLQNAPGPNSQRRASHHLPSQTAYYLRQA
LASLTPGMGQALCGPLYASLAQLYSHHQQHSQAIAFMSQAAEADTEAGVHAVVDRLVALA
WLHMLCGKTLVATDILKSISDAAVANKDQECVMTNMAAMALKRMGRTRQAAEGYFRALHM
AYSQGHLRSQAVVLANFGALCLQAGARSLAQHYLREAVGRFSQLPSGVCGRDFTQVLLWL
GQLCTRRALPQQAKCYYEWAFLVAVEMDHLESQLQAVQKLCHFYSKVMPNEVRCVIYHEF
QLALARRTADKVLEGQLLEAISQLYLSLGTERAYKSALDYTKRSLGIFIDLQQKEKEARA
WLQAGKIYYILRQNELVDLYIQVAQNAALYTGDPKLGLELFEAAGDIFFNGTWEREKAVS
FYRDQALPLAVTVGDQEAELRLCNKLVALLSALEAPQEGLEFAHEALALSITLGDRLNER
VAYHRLATLHHRLGHGELAEHFFLKALSLCNSPLEFDEETLYYVKVYLVLGDIIFYDLKD
PFDAAGYYQLALAAAVDLGHKKAQLKIYTRLATIYHHFLMDREMSLFFYQKARTFASELN
LRRTNLVPQRFCGRALWLTPGHPS
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atgaggagctccagggaggaggaggtgacttctgaggagctagccaccatggggcggggc
tctgacgaacctccaggaggctgtagccatggggaccagatccacagtgtatctgtgagc
ttgcccactggtcaagagagagcagggcctgaggaggctgaggcagcagtcagaggtgat
gtggctcctccccccagtatagctgagctggctgccgaaactacttccagccaagtggca
gtgtatcccacagacctgaccctgcagctgttggccgtgaggcggaagagtgggctgcgg
agtcccagcctgcagcaggccctgaggagccgcctgcgcctgctggagaatgacagccgg
gaagtggcccgtgtgctcggagaactgtcagccaggctgctgtccatccacagtgaccag
gaccggatcgtggtgacgtttaagacttttgaagaaatctggaagttttctacctaccat
gctcttggcttcacgcaccactgcctggagaacctgctggtggaccagacattctggttg
ctctcacccagtgaggaggaagagacggccattctcatgtatgtaaacaaggatgccttg
aagcagacgcacaagagcctcctcgcccaggaagggcccttctttgttctgtgtcccgac
caacgtgtgagaatgatgatgggaccccagggtgcagggaagggcccccaggctctcagg
cgagcttcgggggttcctctgggaatggcagtcctgggaacagactcctcgtcctccacg
cccagcacatcctccaaggtggaagcagcagaggccgagccagagcccttgactccattt
caccagtggactctcagggtgccatgggatcccatcgatgaatccatggatggacctggg
acgcctggtgctcagctgatggggtttggcctggcctctgcagtagctgacttccagggc
tcagggcccgaagagatatccttctgtgtcggtgatgtcatcgaggtcatcggcgcccag
gtgcctggcctgccctggtgtgtgggccggcacgtggcctctggccaggtgggctttgtg
aggactggcctcgtcagcatgcagggctcggcatctgacctggaaagtgcagttttcctc
agtgaggaagaaagatcattcttcagcagtgagggccacttctcagatgaggatgctcgg
cggctcctgagcaggacatctggcacagatgtgtgcaccacatgcagcctggactggtta
gaagaagctgaggcggagcagctggagcaacgagaaatgtctctacatcatccgaaccca
gagccacatgagactctgcacatggtaaaagatgttctagaacggtgcaaggcctgccct
gactaccctgaagacccagtatcctggagtcttggagcagtctccagcagagtgagtaca
ccagacactgaggatccccccttctgcctggatcctgaggatgactggacagaccctgag
cctccagactcactgctgcaggtcctgaacgcccctggttatgaggcccacttccggggc
ctgtatgacatctcgcttccctggctgggcactgccctctgtggctttgatgatgaagag
gagttggctggatgcttggcacaggcccgaggagttgccaagaaagtcaatttgggcatg
gccctggccaggctctgccttctgctggggcggctgtgtgctcgaaaactcaagctatcc
caggcccgggtgtactttgaggaagcactgggggctctggagggcacttttggggacctc
tccctggtggcggcagtctataccagcctggctaccgtgtacctgaagcagaagaacggg
gagaagtgtgtgcaggtggcacccaaagctgcagcccttctcctggggacgcccggccat
gcatacagcacagatgctgagctcctgaagtacgcactgcgcagggccatctgtggcctc
agcccacaggctgaggcccgggcctgcttcctgctggccaggcactacacccacctcaag
cagcctgaggaggcactgccctacctggagagactgcttcgcctcaacagggatgtgggg
accccgcaggcctcatggcccgaggactgttacctgctcctggcggacatctatggccgg
aagtgcctgccccacttggcactgagttgcctcagggtgtcctcactgtggactcggtgc
tcattggccggctccttgaggagtgtggacctggtactccagaatgctcctgggccaaac
agccaaaggagggccagccatcacctcccctcccagactgcttactacctcaggcaggca
ttggcctctctcactccaggcatgggacaggcactgtgtgggcctctctatgccagtcta
gctcagctgtacagccaccatcagcagcacagtcaggccattgccttcatgtctcaggct
gcagaagcagacactgaggctggggtccacgctgtcgtggaccgcttggtggcgcttgcc
tggctgcacatgctctgtggaaagaccttagtagctacagacatcctgaagtccatctca
gatgcagctgtggccaacaaggaccaggagtgtgtgatgaccaacatggcagccatggcc
ctgaaaaggatgggcaggacccggcaggctgccgaaggctacttccgagccctgcacatg
gcctacagccagggtcacctgcggagccaggcagtagtcctggctaactttggggccctg
tgcctgcaagcaggtgcacgtagcttggcccaacactacctgcgggaggcggtggggcgc
ttctcccagctgcccagtggtgtgtgtggccgggacttcactcaggttctcctgtggctg
ggccagctctgcacccgccgagccctcccccagcaggccaagtgctactatgagtgggcc
ttcctggtggctgtggagatggaccatctggagagccagttacaggctgtgcaaaagctc
tgccacttctacagcaaggtcatgcccaacgaggtgcgatgcgtcatctaccatgagttc
caactggccctggcacgcaggacagctgacaaggtcctggagggtcagctcctggaggcc
atcagccagctctacctgtcactgggcaccgagcgggcctacaagtctgctctggattac
accaaacgaagcctggggatcttcatcgacctgcagcagaaggagaaggaggcacgtgcc
tggctgcaagctgggaagatctactatatcctgcgccagaatgagctggtggacttgtac
atccaggtggcacagaacgcagccctgtatactggggaccccaagctggggctggagctg
tttgaggcagctggtgacatcttcttcaatgggacctgggagcgggagaaagctgtgtct
ttctaccgggaccaggcgctgcccctggctgtgaccgtaggggaccaagaggcagagctg
cgcctatgcaacaagctggtggcccttctgtcggcactggaggcaccccaggagggccta
gagttcgcccatgaagccctagcactcagcatcaccctaggtgaccgcctgaatgagcga
gtggcctaccaccgcctagccaccctccaccaccggctgggccacggagaactggctgag
cacttcttcctcaaggctctgtcactctgcaactcacccctggaattcgatgaggagacc
ctgtactatgtgaaggtgtacctggtgctgggtgacatcatcttctatgacctgaaggac
ccatttgatgctgctgggtattaccagctggcgctggcagcggccgtggacctgggccac
aagaaagctcagctgaagatctacacacgcttggccaccatctaccaccacttcctcatg
gaccgtgagatgtccctcttcttctaccaaaaagcaaggacctttgcctcagaactgaac
ctccgtaggaccaacctggtgccccagcgcttctgtggccgggcactctggctgacccct
ggccacccatcctga
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