Peromyscus maniculatus bairdii (prairie deer mouse): 102925503
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Entry
102925503 CDS
T11302
Symbol
Rnf38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X6
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmav04121
]
102925503 (Rnf38)
Enzymes [BR:
pmav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102925503 (Rnf38)
Ubiquitin system [BR:
pmav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102925503 (Rnf38)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
VPS18_RING_C
zf_RING_Vps8_fungal
zf-C3H2C3
zf-RING-like
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
102925503
NCBI-ProteinID:
XP_015860119
Ensembl:
ENSPEMG00000002845
UniProt:
A0A6J0DZ09
LinkDB
All DBs
Position
2:complement(68340792..68462823)
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AA seq
464 aa
AA seq
DB search
MRESEDSPSPKRQRLSHSVFDYTSASPAPSPPMRPWEMTSNRQPPSVRANPHHFSGERCS
TPARNRRSPPVRRQRGRRDRLSRHNSISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLL
HPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSV
VFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLIHPPHLSPHHPPHLPPPG
QFVPFQTQQSRSPLQRIENEVELLGEHLQVGSFTYPPSAHPPTLPPSAPLQFLTHDPLHQ
EVSFGVPYPPFMPRRLTGRSRYRSQQPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELD
VEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFE
SRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADASEVHRDSE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgagagagagtgaagatagtccaagtcctaagagacagcgcctctctcattcagtcttt
gattatacgtcagcatcaccagctccctccccaccaatgcgaccatgggagatgacatca
aataggcagcccccttcagtccgagcaaacccacatcacttctcaggggaacggtgcagc
acacctgcgcgcaaccgaagaagtcctcctgttaggcgtcagcgaggaagaagggatcgt
ctctctcgacataattccattagtcaagatgaaaactatcaccatctcccttatgcacag
cagcaagcaatagaggaacctcgagccttccaccctccgaatgtatctccccgtctgtta
catccagctgctcatccaccccagcagaatgcagtcatggttgacatccatgaccagctc
catcaaggaacagttcctgtctcctacacagtaaccacggtggcaccccatgggattcca
ctctgcacaggccagcacatccctgcttgcagtacacaacaggtcccaggatgctctgtg
gtcttcagtggacaacacctacctgtctgtagtgtgcctcctccaatgcttcaggcatgt
tcagttcagcacttaccagtaccatatgctgcgtttccgccccttatttctagcgatcca
tttcttatacatcctcctcacctgtctccccatcatcctcctcacttgccaccaccaggc
caatttgtccctttccaaacacagcagtcacgatcgcctcttcagaggatagaaaatgaa
gtggaactcttaggagaacatcttcaagtaggcagttttacttaccccccttcggcccat
cccccaacattacctccgtcagctcctttgcagttcctgacacatgatcctttgcatcag
gaggtgtcctttggcgtaccttaccctccgtttatgcctcggagactcacaggacgcagt
agataccgatcccagcagccaataccacctcccccttatcatcccagcttactgccatat
gtgctatcaatgcttccagtaccacctgcagtgggcccaactttcagctttgaattggat
gtggaagatggagaagtagaaaattacgaggccctgctaaacctggcggagcggctggga
gaggcgaagccgcggggactgactaaagcagatattgaacagctgccttcctacaggttc
aaccccaacaaccaccagtcggagcagactctgtgtgtagtatgcatgtgtgattttgag
tcaaggcagcttcttagagtcttaccctgtaatcacgagttccatgccaagtgtgtcgat
aaatggcttaagggaaatcgtacttgcccaatttgccgagctgatgcttcagaagtgcat
cgggattccgagtga
DBGET
integrated database retrieval system
