Peromyscus maniculatus bairdii (prairie deer mouse): 102926027
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Entry
102926027 CDS
T11302
Symbol
Lrrc4b
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04514
Cell adhesion molecule (CAM) interaction
pmav04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
102926027 (Lrrc4b)
04517 IgSF CAM signaling
102926027 (Lrrc4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmav04515
]
102926027 (Lrrc4b)
Cell adhesion molecules [BR:
pmav04515
]
Immunoglobulin superfamily
NGL family
102926027 (Lrrc4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_14
LRR_1
ig
LRR_9
V-set
Ig_2
LRRNT
LRR_EndoS
DUF7617
Motif
Other DBs
NCBI-GeneID:
102926027
NCBI-ProteinID:
XP_006986247
Ensembl:
ENSPEMG00000008499
UniProt:
A0A6I9LX18
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All DBs
Position
1:complement(37626748..37662635)
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AA seq
709 aa
AA seq
DB search
MAQAHARGSPCPLLPPGRMSWPHGALLLLWLFSPPLGAGGGGVAVTSAAGGGSPPATSCP
AACSCSNQASRVICTRRELAEVPASIPVNTRYLNLQENSIQVIRTDTFKHLRHLEILQLS
KNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAF
NRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSG
NRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFT
PLHRLERVHLNHNPWHCNCDVLWLSWWLKETVPSNTTCCARCHAPAGLKGRYIGELDQSH
FTCYAPVIVEPPTDLNVTEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHD
GTLNFTNVTVQDTGQYTCMVTNSAGNTTASATLNVSAVDPVAAGGAGGGGPGGGGGAGGA
GGYTYFTTVTVETLETQPGEESQQPRGTEKEPPGPTTDGAWGGGRPDAAAPASASTTAPA
PRSSRPTEKAFTVPITDVTENALKDLDDVMKTTKIIIGCFVAITFMAAVMLVAFYKLRKQ
HQLHKHHGPTRTVEIINVEDELPAASAVSVAAAAAVAGGAGVGGDSHLALPALERDHLNH
HHYVAAAFKAHYGGNPGGGCGAKGPGLNSIHEPLLFKSGSKENVQETQI
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagcccacgcccgtggctccccgtgccccctgctgccgcctggtaggatgtcc
tggccccacggggctctcctgctcctgtggctcttctccccacccctgggggccggtggg
ggcggtgtggccgtgacctcagccgctggaggaggctccccgccagccacctcctgccca
gcagcctgctcctgcagcaaccaggccagccgggtgatctgcacgcggagggagctggcc
gaggtgcctgccagcatccctgtcaacacccgctacctgaacctgcaagagaacagcatc
caggtgatccgcacagacacattcaagcacctcaggcacctggagatcctgcagctgagc
aagaacctggtgcgcaagattgaggtgggcgcattcaatgggctgcctagtctcaacaca
ctggaactcttcgacaaccggctgaccacagtgcccacacaggccttcgagtacctgtcc
aagctccgggagctgtggctgcgcaacaaccccatcgaaagcatcccatcctatgccttc
aatcgcgtgccctcactgcgccgcctggacctgggcgagctcaagcggctggagtacata
tcagaggcggccttcgaggggctggtgaacctgcgctacctcaatctgggcatgtgcaac
ctaaaggacatccccaacctcacggcgcttgtgcgcctggaggagttggagctgtcaggg
aaccggctggacctaattcgccccggctctttccagggcctcaccagcctgcgcaagctg
tggctgatgcatgcccaagtggccaccatcgagcgaaatgcctttgacgacctcaagtcg
ctagaggaactcaacctgtcccacaacaacctgatgtcgctgccacacgaccttttcaca
cccctgcaccgcctagagcgcgtccacctcaaccacaacccctggcactgcaactgtgat
gtgctgtggctcagctggtggctaaaggagacagtgcccagcaacaccacatgctgcgca
cgctgccacgctcccgctggcctcaagggccgctacattggtgagctggaccagtcacac
ttcacctgctacgccccggtcatcgtggagccacccacagacctcaatgttaccgagggt
atggcggccgagctcaagtgtcgcacaggcacatccatgacctctgtcaactggctgaca
cctaatggcacgctcatgacgcatggttcctaccgcgtgcgcatctcagttctgcacgat
ggcacgctcaacttcaccaatgtcaccgtgcaggacacgggccagtacacgtgcatggtg
acaaactcggctggcaacaccactgcctcggccacgcttaacgtgtcggctgtggaccct
gtggccgcagggggggctgggggcgggggccccgggggtgggggcggtgcagggggtgcg
ggcggctacacctacttcaccacggtgaccgtggaaacgctggagacacagccgggtgag
gagtcgcagcagccccggggtacggaaaaggagcccccggggcccacgaccgatggcgca
tggggcggtggccggcctgatgccgcagccccggcctcggcgtccaccacggcgccggcc
ccacgctcctcgcggcccacggagaaggcgttcacggtgcccatcacggacgtgacggag
aacgcgcttaaggacctagacgacgtcatgaagaccaccaaaataatcatcggctgcttc
gtggccatcaccttcatggccgctgtgatgctggtggccttctacaagctgcgcaagcag
caccagctgcacaagcaccacgggcccacgcgcactgtggagatcatcaacgtggaggac
gaacttcccgccgcctccgctgtgtcggtggccgcggccgccgctgtggcgggaggcgcg
ggcgtgggcggggacagccacctggcccttccggcgctggagcgagaccacctcaaccat
caccactacgtggcggccgccttcaaggcacactacggcggcaacccaggaggcgggtgc
ggggccaagggccccggcctcaactccatccacgaacctctgctcttcaagagcggctcc
aaggagaacgtgcaagagacacaaatctaa
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