Peromyscus maniculatus bairdii (prairie deer mouse): 102926403
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Entry
102926403 CDS
T11302
Symbol
Traip
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmav04121
]
102926403 (Traip)
Enzymes [BR:
pmav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102926403 (Traip)
Ubiquitin system [BR:
pmav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102926403 (Traip)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
CEP135_TSGA10_CC
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_4
zf-ANAPC11
OVT1
zf-RING_Vps41
CCDC171
zf-RING_11
zf-C3HC4_3
zf-RING_16
Fez1
CEP128
FAR1_N
HIP1_clath_bdg
HmpF
Rod_CreS
MscS_porin
zf_RING_Vps8
zf-RING-like
HMMR_N
CCDC18_1st
His_kinase
WEMBL
CCDC39
LEKR1
GAS
Prok-RING_1
Zn_ribbon_8
RINGv
DUF3450
CCDC93_CC
SAT
CCDC170_1st
CEP63
YqgF
Motif
Other DBs
NCBI-GeneID:
102926403
NCBI-ProteinID:
XP_076433130
Ensembl:
ENSPEMG00000006857
LinkDB
All DBs
Position
7:106033807..106060110
Genome browser
AA seq
470 aa
AA seq
DB search
MPIRALCTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQVGKKSIIN
KLFFDLAQEEETVLDAEFLKNELDSIRAQLSQKEREKRDSQSIIDTLRDTLEERNATVES
LQNALDKTQMLCSTLKKQMKFLEQQQDEAKQAREEARRLKSKMKTMEQIELLLQSQRPEV
EEMIRDMGVGQSAVEQLAVYCVSLKKEYENLKEARKASGELADRLRKDLASSRSKLKTVY
TELDQTKLELRSAQKDLESADKEITSLRKKLTMLQGTLNLPPVASETVSRLVFESPAPVE
MLNPRLHQPSFSDEIDLNATFDVDTPPAQTSSSQHGHPKKLCLERARSPVQDILKKTPKV
YKQESQLSLGGQRCVGELDEELAGAFPLFIRNAVRGQKQPHRTTAASRCSTDAVRVGFDG
LGGRTKFIQPTDSAIIRPMPVKPKAKSKQKVRIKTVNSSSQPKLDTFLWQ
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccgcgccctgtgcactatctgctccgacttcttcgatcactcacgcgacgtg
gctgccatccactgtggccacacttttcacctgcaatgcctgatccagtggtttgagaca
gcaccaagtcggacctgcccacagtgtagaatccaggttggcaaaaagagtattatcaat
aagcttttctttgaccttgcccaggaagaggagactgtcttggatgcagaattcttaaag
aatgagctggacagtatcagagcccagctttcccagaaagagagggagaaacgggacagc
cagtccattatcgacactctacgggacacactggaagaacgcaatgccactgtggagtcc
ctgcagaacgccctagacaagacacagatgctgtgttccactctgaaaaagcagatgaaa
ttcctggaacagcagcaggatgaggccaagcaggctcgggaggaggcccgccgactcaag
agcaagatgaaaaccatggagcaaattgagctcctgctccagagccagcggcctgaggtg
gaggagatgatccgcgacatgggtgtgggacagtcagcggtggagcagctggcggtgtac
tgcgtgtccctcaagaaagagtatgagaatctgaaagaagcgcggaaggcctcgggggag
ctggctgacaggttgaggaaggacttggcctcctcgaggagcaagttgaagactgtctac
actgagctggatcagaccaagttagaactgaggtcagcccagaaggacttagagagcgct
gataaggaaatcacgagcctaagaaagaagctaacgatgctgcaggggaccttgaatctg
cctccagtggccagtgagaccgtcagccgcctggtttttgagagcccagcccctgtggag
atgttgaacccgagactccaccagccatccttcagtgatgagattgacctcaatgctacc
tttgatgtagatacccctccagcccagacctccagctcccagcatggccaccccaagaag
ctctgcctggagagggcacgctctcctgtgcaggacatcctcaagaagacacctaaagtc
tacaagcaggagtcccagctctcactgggtggccagcgctgtgtaggagagctagacgag
gaactggctggtgccttccctctcttcatccggaatgccgtccggggtcagaaacagccc
cacaggaccaccgcagcttcccggtgcagcacagatgcggtaagagtaggcttcgatggg
cttggaggacgaacaaaattcatccagcctacagactcagccattatccggccgatgcct
gttaagcccaaggccaagagtaagcagaaagtgagaataaagactgtgaattcttcctcc
caacccaagctggacaccttcctgtggcagtga
DBGET
integrated database retrieval system
