Peromyscus maniculatus bairdii (prairie deer mouse): 102926537
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Entry
102926537 CDS
T11302
Name
(RefSeq) phospholipid-transporting ATPase ABCA3-like isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102926537
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmav02000
]
102926537
Transporters [BR:
pmav02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
102926537
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
AAA_23
AAA_15
SRP54
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
102926537
NCBI-ProteinID:
XP_006985786
Ensembl:
ENSPEMG00000005882
UniProt:
A0A6I9LW54
LinkDB
All DBs
Position
1:130319815..130426550
Genome browser
AA seq
1682 aa
AA seq
DB search
MVSLRMKQFSVLLWKNLLLKRRNVVGLVVEILLIFLLFAWTLTMRKITKKTFTQAVIFNP
IPLTLPEFVNKKFEYELAYVPSGSDAARNITEMVKKDLNFNFKVRGFSSEESFEKYIKYE
NKSSYVLAAIVFEHMFKTNSERLPLQVKYNLRFGHLYNPNNPLEPSEDQKGKDWNTSILF
PSEPSLGPRRSSEDDGGHPGYIREGFLIVQHSLDKAIMVYHSGRAAEDMFANTTIYAKRF
PYPASIRDRFLWAFIFMFPWTILFTFTQMSLVIVGTIMLEKEKRLKEYQLMVGLSNAMLW
VSYFVTFLLMYFIIICLLCGILFLKITHERVFEHSDPLFIAFYFLCFATSSVLLGFMIST
FFDKASLATSIACFLHFLTFFPYLIILPIYEQTSLGGKLALSLITNTALAFGADIICKME
MKGDGAQWYNFATKIKADDDLTLAHIIGMFLLSAFLYGLVAWYMDAVFPGKYGVPKPWNF
FLQKAYWFGEQASDKEESQITDLPTNDFVEPEPIGLEAGIRIQHLYKQFTLKNSTLMAVK
DLSLNLYEGQITVLLGHNGAGKTTTLSILTGLYLPTRGKVYISGYDISSDMVQIRKSLGL
CPQDDLLFPMLTVSEHLHFYYVIKGISPNERYREIHRMLTSFGLLQKRDAMSKDLSGGMK
RKLSIIIALIGDAKVVILDEPTSGMDPVSRRTTWDLLQQYKENRTILLTTHHMDEADVLG
DRIAILVMGSLKCCGSSLFLKKLYGVGYHLVMVKTPECNVEKISKLIRDYIPTAEMKTDV
AAELSFVLPKDYTHRFAELFRVLEEREEELGITGFGVSMTTMDEVFFKVSNLADIKMNTE
IVQPASTVDRSMSEANQNMNVPRNFDRSDYPRGHSNSSFSTGWALYTQQFRAMFIKRAMF
SWRNWKLLVLQLLALLGLMYLLMKGISFSTPKKPARVMDLEQYGETIVPFSVSGDPVLTQ
KLTKNLEIMLKAKNQKLHEVQGDVQTYLLANEDCIYSCIIAFSLDVTRDQKKFTFWFNNE
AFHSPSLSLSVLDNIIFMSLSGPNATITVSNKPQPQREKKSEKRGSSGIQIVFNLLFGMS
IFTSGFCLMTVTERVSKAKHIQYVSGVYTLNFWLSALLWDLVIHFVACVLLLLVFLITDV
DILLEKYHFLDTMFILMMFGWSVIPFIYLLSFRYNNSTSAYIKIFILNHCLGFMSIIIYD
VVEIIPDITTRTKTFIVDSLLLLPIYNLGMSIFKYHHIQNMKKWCSSQNVTDTDLCLNKI
MKISIYSMDKNAIGRHMTAMAATGVLYLLLIFLLEFSVWNLKTFIYRYVFFGIYKIFSKA
RVSRELSGESEDEDVQNERKTILKYPQKALDSTVLIKELIKIYFKIPPTLAVRNISVTIQ
KEECFGLLGLNGAGKTTTFEILTGEEIATSGDVFIEGYSITKNIRKVRSKIGYCPQFDAL
LDFMTSREILTMYARVWGVPEKNIRPYVDNLLEMLYLQPQAEKFIYTLSGGNKRRLSAAI
AIMGKSSVVFLDEPSTGMDPLARRMLWNTVIRTRESGKVIIITSHSMEECEALCTRLAIM
VQGKFMCLGSPQHLKNKFGNVYTMTIKFKSGTGDKVITDFKKFVTNAFPGSDLKQENQGI
LNYHIPSKDNSWGKVFGILEKAKEQYNLEDYSISQITLEQVFLTFANPDNIESGSAKAKS
VP
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggtttcattgcgcatgaagcaattttcagtcctcctatggaaaaatttacttttgaag
aggcggaacgtggttggcttagtggtggagatcctcttgatatttctattgtttgcatgg
actctgactatgcgcaaaattacaaagaagacatttactcaagctgtgattttcaatcct
attcccctgacattacccgagtttgttaataaaaagtttgaatatgaattggcttatgtg
ccttctgggagtgatgcggcaagaaatattactgagatggtgaaaaaggatttaaatttc
aactttaaagttcgaggcttttcttcagaagaatcttttgagaaatacatcaagtatgaa
aacaagtcttcgtatgtgctggctgctattgtgtttgagcacatgttcaaaaccaacagt
gaacggttgccacttcaggtaaaatataatttgcgttttggtcatctctataatcccaat
aatcccttagagccatctgaggaccagaaaggaaaggactggaacacatcgattctcttc
ccatctgagccttctctaggaccccgaagatcttctgaagacgatgggggacaccctgga
tacatcagagaaggatttcttatcgtacagcattctttagataaggccatcatggtgtac
catagtggcagagcagctgaagacatgtttgctaacaccaccatttatgcgaagagattc
ccataccctgcttccattcgtgacagattcttgtgggctttcatatttatgtttccttgg
acaattttatttacatttactcaaatgtcacttgtcattgttgggaccattatgttggaa
aaggaaaagagattaaaggaataccagctcatggtgggactcagtaatgctatgctctgg
gtttcatatttcgtcaccttcttattgatgtatttcatcatcatctgtttgctgtgtggg
attttatttctcaagattacacatgagagagtctttgaacacagtgacccgctattcatc
gccttctatttcctgtgttttgccacctcctcagtgttacttggcttcatgatcagcaca
ttcttcgataaagcttctctggccacttctattgcatgcttcctccactttctcacattc
tttccgtacttaatcatactcccgatatacgaacagacaagcctcggcgggaagctggct
ctcagtctcatcacaaacacagcactagcttttggggctgacataatatgcaagatggaa
atgaaaggtgatggcgctcagtggtacaactttgctacgaaaataaaagccgatgatgac
ttaactttggctcatataataggaatgtttttacttagtgcttttctgtatggccttgtg
gcctggtacatggatgccgtctttccagggaagtatggtgtgcccaagccgtggaacttt
ttcctgcagaaagcctactggtttggagagcaagcctcagacaaggaagagagccagatc
actgacttacccacaaatgattttgttgaacctgaacctattggcttagaggctggaatc
cggattcaacatttgtacaagcaattcaccttaaaaaatagtaccctgatggcggtaaaa
gacttgtctttgaacttgtatgagggacagataacagttcttctaggacataatggggca
ggaaagaccaccaccttgtccattctcacaggtttgtatcttcctaccagagggaaggtc
tatattagtggatatgacatctcatctgacatggttcaaattaggaaaagcttgggcttg
tgtccccaggatgacctgttgttcccgatgctgacagtgtccgaacaccttcatttctac
tatgtgataaaaggaatatctccaaatgaacgatacagagaaattcacaggatgctcact
tcttttggcctgctacagaaaagggatgcaatgtcaaaggatctgagcggagggatgaag
cgcaaactctcaatcattatagctcttataggagacgctaaggtggtgatacttgatgag
ccaacatctggcatggatccagtctccaggaggaccacctgggacctccttcagcaatac
aaagagaaccgtaccatcctgctgaccacacatcacatggatgaagctgatgtgctgggg
gaccgcattgccatcctggtcatggggtccctgaagtgctgtggctcttcgcttttcctg
aagaaattatatggtgtgggatatcacctagtcatggtgaagactcctgaatgtaatgtt
gaaaaaatctccaagctgattagggattacataccaactgctgagatgaagacggatgtc
gcagctgaattgtcgtttgtcctaccaaaggattatacacacaggtttgcagaacttttc
agagtcctagaagaaagagaagaagagctgggcatcactggctttggtgtctctatgact
accatggatgaggttttcttcaaggtcagtaatcttgcagacataaagatgaatactgag
attgtccaaccagcttccacagtggaccgaagcatgagtgaagctaaccagaatatgaat
gtacccagaaattttgatagatcagattatccaagaggacactctaattcttccttcagt
actgggtgggctctttacacccagcagttccgagccatgttcatcaaaagggcaatgttc
tcttggcgcaactggaaactgctggtgttgcagttgctggcacttctgggtctcatgtat
cttctgatgaaaggcataagcttctcaacacctaaaaagcctgccagggtaatggacttg
gagcagtatggcgagaccattgtgcctttctcagtttctggagatcctgttttgacccag
aagctcaccaaaaatcttgagatcatgttaaaggctaaaaaccaaaaacttcatgaagtg
caaggtgatgtgcagacctacttgctggcaaatgaagactgcatttactcatgcatcatt
gcattttcccttgatgtgactagagaccagaagaaattcaccttctggttcaacaatgag
gcattccattcgccatccttatccttgtcagttttagacaatattatttttatgtctctc
tccggccccaatgccaccattactgtctccaacaagccccagcctcaacgtgagaaaaag
tctgagaaaagaggcagctcgggaatccagatagtctttaacttgctctttgggatgagt
attttcaccagtggcttttgccttatgactgtgactgagagagttagtaaagcaaagcat
atccagtatgtgagtggggtctacaccttgaatttctggctttctgctctgctgtgggat
ctcgtcatccactttgttgcctgtgtcctactgctgctggtgttcctaatcactgatgta
gatatattgttggagaagtaccacttcctggacacgatgttcatcctcatgatgtttgga
tggtctgtcatccctttcatctacctgctaagcttccggtacaacaatagcaccagtgcc
tatatcaagatcttcatcctcaaccactgtttagggtttatgagtataattatatacgat
gtggtagagataataccagacattacgacccgtactaagacattcatagttgactcgctg
ctgctgttacccatttataaccttgggatgagcatcttcaaataccatcacatccaaaat
atgaagaaatggtgttcttcacaaaatgttactgacactgatttgtgcttaaacaaaata
atgaaaatttccatatacagtatggacaaaaacgccattggaaggcacatgactgccatg
gctgccacaggagtgctatacctcctcctcattttccttctggagtttagcgtatggaat
ttaaaaacgttcatatatcgctatgttttttttggaatctataagatatttagtaaggct
agagtgtccagggagttatccggggaatctgaagatgaagatgtacaaaatgaaaggaag
actatcctgaagtatcctcagaaggcactggattctactgtgctcataaaagagctcata
aagatatattttaaaataccacccactctggctgtgagaaatatctctgtcaccatccaa
aaggaggagtgttttggattgcttggcctaaatggagctggaaaaactactacctttgaa
attctgactggagaagagattgctacgtctggggatgtgttcattgaaggctacagcatc
accaaaaatatccgaaaggttaggtcaaaaattggctattgtccacaatttgatgccttg
ctggatttcatgacctctcgggagatattgaccatgtatgccagggtgtggggggttcca
gagaagaatattagaccctatgtggacaacttgttggaaatgctgtacctgcaaccacaa
gctgagaagtttatttacactttgagtggaggaaacaaacgcaggctgagcgccgctatt
gccatcatgggaaagtcgtcagtggtcttcctggatgagccgtccactggcatggacccg
ttagcccggcgcatgctctggaacacagtgataaggacccgagagagtggcaaggtcatc
atcataacctctcacagtatggaggagtgtgaagctctctgtaccaggctagccatcatg
gtgcagggaaagttcatgtgcctggggagccctcagcatctcaagaacaaatttggcaat
gtttacaccatgactatcaagttcaaaagtggcactggtgacaaagtgataacggatttt
aaaaaatttgttaccaacgctttcccaggtagtgacttgaagcaagagaatcaagggatc
cttaattaccacattcccagcaaggacaacagctggggaaaggtgtttggcattctggag
aaagcgaaagagcaatacaatttagaagactattccatcagtcagatcaccctggagcaa
gttttcctgacctttgccaacccagataacatagaaagtggttctgcaaaagccaaatcg
gtgccttga
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integrated database retrieval system
