Peromyscus maniculatus bairdii (prairie deer mouse): 102926734
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Entry
102926734 CDS
T11302
Symbol
Gpcpd1
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav00564
Glycerophospholipid metabolism
pmav05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
102926734 (Gpcpd1)
09160 Human Diseases
09161 Cancer: overview
05231 Choline metabolism in cancer
102926734 (Gpcpd1)
Enzymes [BR:
pmav01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
102926734 (Gpcpd1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDPD
C2_GDE1
CBM_20
PI-PLC-X
Y4rL_C
Motif
Other DBs
NCBI-GeneID:
102926734
NCBI-ProteinID:
XP_006984043
Ensembl:
ENSPEMG00000023089
LinkDB
All DBs
Position
4:complement(110598442..110656225)
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AA seq
679 aa
AA seq
DB search
MTPSQVTFEIRGTLLPGEVFAICGSCDTLGNWNPQNAVALLPENETGESMLWKATIALSR
GISIQYRYFRGCFLEPKTIGGPCQVIVHKWETHLQPRSITPLESEIIIDDGQFGIHNGVE
TLDSGWLTCQTEIRLRLHYSEKPPVSITKKKFKKSRFRVKLTLEGLEEDDDDKVSPTILH
KMSNSLEISLISDNEFKCRHSQPECGYGLQPDRWTEYSIQTMEPDNLELIFDFFEEDLSE
HVVQGDALPGHVGTACLLSSTIAEGERSAGVLTLPIMSRNSRKTIGKVRVDFIIIKPLPG
YSCSMQSSFSKYWKPRIPLDVGHRGAGNSTTTAQLAKVQENTIASLRNAASHGAAFVEFD
VHLSKDFVPVVYHDLTCCLTMKKKKFVHTQKFEADPVELFEIPVKELTFDQLQLLKLSHV
TALKAKDRKQSLVEEENFFSENQPFPSLKMVLESLPEDVGFNIEIKWICQHRDGVWDGNL
STYFDMNLFLDIILKTVLENSGKRRIVFSSFDADICTMVRQKQNKYPILFLTQGKSDIYP
ELMDLRSRTTPIAMSFAQFENILGINAHTEDLLRNPSYVQEAKAKGLVIFCWGDDTNDPE
NRRKLKEFGVNGLIYDRIYDWMPEQPNIFQVEQLERLKQEVPELKSCLCPPVSHFVPSSF
CGEPDIHVDANGIDNVETA
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgacaccttctcaggtcacctttgaaataagaggaactcttttaccaggagaggttttt
gcaatatgtggaagctgtgataccctgggaaactggaatcctcaaaatgctgtggctctt
cttccagagaacgagacaggagaaagtatgttatggaaagcaacgattgctctcagtaga
ggaatatcaattcagtaccgctacttcagagggtgctttttagaaccaaagactatcggt
ggtccatgtcaagtcatagttcacaagtgggagactcatctacaaccacgatcaataacc
cctttagaaagcgaaatcattattgatgatggacaatttggaatccacaatggtgttgaa
acactggattctggatggctcacatgtcagactgaaataagattacgtctgcattattct
gagaaacctcctgtctcaattaccaagaaaaaattcaaaaagtctagatttagggtaaag
cttacactagagggtctggaggaagatgatgacgacaaggtgtctcccactattcttcac
aaaatgtccaacagcctggagatatctttaataagtgacaatgagttcaagtgcaggcac
tcacagccagaatgtgggtatggcttacagcctgatcgctggaccgagtacagcatacag
acaatggagccagataacttggaattaatctttgacttttttgaggaagatctcagtgag
catgtagttcagggtgatgctcttcctggacatgtgggcacagcatgcctcctgtcatct
accattgctgagggtgagaggagcgctggagtccttactctgcccatcatgagcagaaat
tccagaaaaactataggcaaagtcagagttgattttatcatcatcaagccattaccagga
tacagttgttctatgcagtcttcattttccaagtattggaagccaagaataccactggat
gttggacatcgtggtgcagggaattcaacaacaactgcccagctggctaaagtacaggaa
aatactattgcttccttaagaaatgctgccagtcatggtgcagcatttgtagagtttgat
gttcacctttcgaaggactttgtgcctgtggtatatcatgatctcacctgctgtttgact
atgaaaaagaaaaaatttgtgcatacacagaaatttgaagctgatcctgttgaattgttt
gaaattccagtaaaagaattaacatttgaccagctccagttgttgaagctttctcacgtg
actgcactaaaagccaaagatcggaaacaaagtctggtggaggaagaaaatttcttttct
gaaaaccaaccatttccttctcttaagatggttttagaatcattgccagaagatgtagga
tttaatatagaaataaaatggatttgccaacacagggatggcgtgtgggatggcaattta
tcaacatattttgacatgaatctgttcttggatataattttaaaaactgttttagaaaat
tctgggaaaaggagaatagtattttcttcattcgatgcagatatttgtacaatggttcga
caaaagcaaaacaaatatcccatattatttttgacccaagggaaatctgatatttaccct
gaactcatggacctcagatctaggacaacacccattgctatgagctttgcacaatttgaa
aatattttggggataaatgctcatactgaagacctgcttagaaacccatcctatgtccaa
gaggcaaaagctaagggattggtcattttctgctggggtgatgataccaatgaccctgaa
aacagaaggaaactgaaggaatttggagtaaatggtctaatatatgataggatatacgat
tggatgcctgaacagccaaatatattccaagtggagcagttggagcgcctgaagcaagaa
gtgccggagcttaagagttgtttgtgtccccccgttagccactttgtcccttcttctttc
tgcggggagcctgatatccatgtagacgccaacggcattgataatgtggagaccgcttag
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