Peromyscus maniculatus bairdii (prairie deer mouse): 102926952
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Entry
102926952 CDS
T11302
Symbol
Hdac5
Name
(RefSeq) histone deacetylase 5 isoform X2
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04371
Apelin signaling pathway
pmav04613
Neutrophil extracellular trap formation
pmav05034
Alcoholism
pmav05203
Viral carcinogenesis
pmav05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
102926952 (Hdac5)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
102926952 (Hdac5)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
102926952 (Hdac5)
05203 Viral carcinogenesis
102926952 (Hdac5)
09165 Substance dependence
05034 Alcoholism
102926952 (Hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmav03036
]
102926952 (Hdac5)
Enzymes [BR:
pmav01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
102926952 (Hdac5)
Chromosome and associated proteins [BR:
pmav03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
102926952 (Hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
TFIIA
Motif
Other DBs
NCBI-GeneID:
102926952
NCBI-ProteinID:
XP_006970672
Ensembl:
ENSPEMG00000010094
UniProt:
A0A6I9KZQ7
LinkDB
All DBs
Position
8:complement(89338445..89374553)
Genome browser
AA seq
1117 aa
AA seq
DB search
MNSPNESADGMSGREPTLEILPRTPLHSIPVAVEVKPVLPGAMPSSMGGGGGGSPSPVEL
RGALAGPMDPALREQQLQQELLVLKQQQQLQKQLLFAEFQKQHDHLTRQHEVQLQKHLKQ
QQEMLAAKRQQELEQQRQREQQRQEELEKQRLEQQLLILRNKEKSKESAIASTEVKLRLQ
EFLLSKSKEPTPGGLNHSLPQHPKCWGAHHASLDQSSPPQSGPPGTPPSYKLPLLGPYDS
RDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAVEITGTGPGVP
SSACNSACNSAPGSGPSSPNSSHSTIAENGFTGSVPNIPTEMLPQHRALPLDSSPNQFSL
YTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQSLRQGGTLTGKFMSTSSI
PGCLLGVALEGDTSPHGHASLLQHVLLLEQARQQSTLIAVPLHGQSPLVTGERVATSMRT
VGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKHQQMQLGKILTKTGELPR
QPTTHPEETEEELTEQQEALLGEGALTMPREGSTESESTQEDLEEEEEEEEEEEDCIQVK
DEDGESGPDEGPDLEESSAGYKKLFTDAQQLQPLQVYQAPLSLATVPHQALGRTQSSPAA
PGSMKSPPDQPTKHLFTTGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLS
KCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIG
VDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFF
NSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSG
APEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDA
VEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSV
ELQPLDEAVLQQKPSVNAVTTLEKVIEIQSKHWSCVQRFATGLGCSLREAQTGETEEAET
VSAMALLSVGAEQAQAVATLEHSPRPAEEPMEQEPTL
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgaactctcccaacgagtcggcagatggcatgtcaggccgggaaccaaccttggaaatc
ctgccgcggactcctctgcacagcatccctgtggcagtggaggtgaagccggtgctgcca
ggagccatgcccagctccatggggggtggaggtggaggtagccccagccctgtggagctg
cggggggctctggcaggccccatggaccctgcgctacgggagcagcagctgcagcaagag
ctcctggtgctcaagcagcagcagcagctgcagaagcagctcttgttcgccgagtttcag
aagcagcacgaccacctgacgaggcagcatgaagtccagctgcagaagcacctcaagcag
cagcaggagatgctggcggctaagaggcagcaggagctggagcagcagcggcagcgggag
cagcagcggcaagaggagctggagaagcagcggctggagcagcagctgctcatcctccgc
aacaaggagaagagcaaagagagtgccatcgccagcaccgaggtaaagctgaggctccag
gaattcctcttgtcgaagtcaaaggagcccacgccaggcggcctcaaccattccctccca
cagcaccccaaatgctggggagcccaccacgcttctttggaccagagttcccctccccag
agcggccctcctgggacgcctccctcctacaaactgcctttgcttgggccctatgacagc
cgcgatgacttccccctccgcaaaacagcctctgaacccaacttaaaagtccgttcgagg
ctaaaacagaaggtggcggagaggagaagcagtcccctcctgcgtcgaaaggatggcact
gttatcagtacctttaagaagagagcggttgaaatcacgggcacagggcctggggtgccg
tcctctgcgtgtaacagtgcgtgtaacagtgcgcccggctccggccccagctctcccaac
agttcccacagcaccatcgctgaaaacggcttcactggctcggtccccaacatccccacg
gagatgctcccccagcaccgggccctccctctggacagctccccaaaccagttcagcctc
tacacgtctccttctctgcccaacatctccctagggctgcaggccacagtcactgtcacc
aactcgcacctcaccgcctccccgaagctgtcgacacagcaggaggctgagaggcaggcc
cttcagtccctgcggcagggcggcacactgactggcaagttcatgagcacgtcgtccatc
cccggctgcctgctgggcgtggcactggagggcgacacgagcccccacgggcacgcctct
ctgctgcagcatgttctgctcctggaacaggcccggcagcagagcacactcatagctgtg
ccgctccatgggcagtccccattggtgacgggcgaacgtgtggccaccagcatgaggacg
gtgggcaagctcccgaggcaccgacctctgagccgcactcagtcctccccactgccgcag
agtccccaggcgctgcagcagctggtcatgcagcagcagcaccagcagttcctagagaag
cagaagcaccagcagatgcagctgggcaagatccttaccaagactggggaactgccaagg
cagcccaccacccaccccgaggagacggaggaggagctgacagagcagcaggaggccttg
ctgggggagggggccctgaccatgccccgggaaggctccacagagagcgagagcacccag
gaagacctagaggaggaggaggaggaagaggaggaggaggaagactgcattcaggtcaag
gatgaggacggcgagagtggtcctgatgagggccccgacttagaggagtccagtgctggc
tacaaaaagttgttcacagatgcccagcagctgcagcccctgcaggtgtaccaggcaccc
ctcagcctggccactgtgcctcatcaggccctgggccgcacccagtcctcgcctgctgct
cccgggagcatgaagagccccccagaccagcccactaagcacctcttcaccacaggtgtg
gtctatgacacgttcatgctgaagcaccagtgcatgtgcgggaatacacatgtgcaccca
gagcacgccggccgcatccagagcatctggtcccggctgcaggagactggcctgctcagc
aagtgtgagcggatccggggtcgcaaagccacgctggatgagatccagacagtgcactct
gagtaccacaccctgctctatgggaccagccccctcaaccggcagaagctggacagcaag
aagctgcttggccccatcagccagaagatgtacgccatgctgccttgtgggggcattggg
gtggacagtgacactgtgtggaatgagatgcactcctccagtgccgtgcggatggcagtg
ggctgcctggtggagctggccttcaaggtggctgcgggagagctgaagaatggatttgct
atcatccggcccccaggacatcatgccgaggagtccacagccatgggattctgcttcttc
aactccgtggccatcacagctaaactcctgcagcagaagctgaacgtgggcaaggtcctc
atcgtggactgggacattcaccatggcaacggcacccagcaagcattctacaatgacccc
tctgtgctctacatctccctgcatcgctatgacaatgggaacttctttccgggctctggg
gctcctgaagaggttggtggagggccaggcgtggggtacaatgttaatgtggcgtggaca
ggaggtgtggatccccccattggcgatgtggaatacctgacagccttcaggacagtggtg
atgcccattgctcacgagttctcacctgacgtcgtcctagtctccgctgggtttgatgct
gttgaaggacatctgtctccactgggtggctattctgtcaccgccagatgttttggccac
ctcaccaggcagctcatgacactggccgggggccgggtggtgctggccctggagggaggc
cacgacttgaccgccatctgtgatgcctccgaggcctgtgtctcggctctgctcagcgtg
gagctgcagcccttggatgaagcagtcttgcagcaaaaacccagcgtcaatgcagttacc
acactagagaaagtcatcgagatccagagcaaacactggagctgtgtacagaggtttgcc
actggcctaggctgctctctgcgggaggctcagacaggtgagacggaggaggccgagact
gtgagcgccatggccctgctttctgtgggggctgagcaggcccaggctgttgccactcta
gagcacagccccaggccggcagaggaacccatggagcaggagccaaccctgtga
DBGET
integrated database retrieval system
