KEGG   Peromyscus maniculatus bairdii (prairie deer mouse): 102927118
Entry
102927118         CDS       T11302                                 
Symbol
Pdgfb
Name
(RefSeq) platelet-derived growth factor subunit B isoform X1
  KO
K17386  platelet-derived growth factor subunit B
Organism
pmav  Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav01521  EGFR tyrosine kinase inhibitor resistance
pmav04010  MAPK signaling pathway
pmav04014  Ras signaling pathway
pmav04015  Rap1 signaling pathway
pmav04020  Calcium signaling pathway
pmav04072  Phospholipase D signaling pathway
pmav04151  PI3K-Akt signaling pathway
pmav04510  Focal adhesion
pmav04518  Integrin signaling
pmav04540  Gap junction
pmav04630  JAK-STAT signaling pathway
pmav04810  Regulation of actin cytoskeleton
pmav05167  Kaposi sarcoma-associated herpesvirus infection
pmav05200  Pathways in cancer
pmav05206  MicroRNAs in cancer
pmav05211  Renal cell carcinoma
pmav05214  Glioma
pmav05215  Prostate cancer
pmav05218  Melanoma
pmav05231  Choline metabolism in cancer
pmav05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:pmav00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    102927118 (Pdgfb)
   04014 Ras signaling pathway
    102927118 (Pdgfb)
   04015 Rap1 signaling pathway
    102927118 (Pdgfb)
   04630 JAK-STAT signaling pathway
    102927118 (Pdgfb)
   04020 Calcium signaling pathway
    102927118 (Pdgfb)
   04072 Phospholipase D signaling pathway
    102927118 (Pdgfb)
   04151 PI3K-Akt signaling pathway
    102927118 (Pdgfb)
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    102927118 (Pdgfb)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102927118 (Pdgfb)
   04540 Gap junction
    102927118 (Pdgfb)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    102927118 (Pdgfb)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    102927118 (Pdgfb)
   05206 MicroRNAs in cancer
    102927118 (Pdgfb)
   05231 Choline metabolism in cancer
    102927118 (Pdgfb)
  09162 Cancer: specific types
   05214 Glioma
    102927118 (Pdgfb)
   05218 Melanoma
    102927118 (Pdgfb)
   05211 Renal cell carcinoma
    102927118 (Pdgfb)
   05215 Prostate cancer
    102927118 (Pdgfb)
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    102927118 (Pdgfb)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    102927118 (Pdgfb)
  09176 Drug resistance: antineoplastic
   01521 EGFR tyrosine kinase inhibitor resistance
    102927118 (Pdgfb)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:pmav04052]
    102927118 (Pdgfb)
   00536 Glycosaminoglycan binding proteins [BR:pmav00536]
    102927118 (Pdgfb)
Cytokines and neuropeptides [BR:pmav04052]
 Cytokines
  Growth factors (RTK binding)
   102927118 (Pdgfb)
Glycosaminoglycan binding proteins [BR:pmav00536]
 Heparan sulfate / Heparin
  Growth factors/receptors
   102927118 (Pdgfb)
SSDB
Motif
Pfam: PDGF PDGF_N
Other DBs
NCBI-GeneID: 102927118
NCBI-ProteinID: XP_006979227
Ensembl: ENSPEMG00000010524
UniProt: A0A6I9LHB6
LinkDB
Position
20:complement(49329285..49347801)
AA seq 241 aa
MNRCWALFLPLCCYLRLVSAEGDPIPEELYEMLSDRSIRSFDDLQRLLHGDSVDENGAEL
DLNMTRAHSGGEPESSARGRRSLGPLAAAEPAVIAECKTRTEVFQISRNLIDRTNANFLV
WPPCVEVQRCSGCCNNRNVQCRASQVQMRPVQVRKIEIVRKKPIFKKATVTLEDHLACKC
ETVVTPRPVTRSPGTSREQRAKTPQTRVTVRTVRVRRPLKGKLRKFKHTHDKEALKETLG
A
NT seq 726 nt   +upstreamnt  +downstreamnt
atgaatcgctgctgggcgctcttcctgcctctctgctgctacctgcgtctggtcagcgcc
gagggggaccccattcccgaggaactctatgagatgctgagtgaccgctccatccgctcc
ttcgacgaccttcagcgtctgctgcatggagactccgtagatgaaaatggggctgagctg
gacctgaacatgacccgagcacactctggaggcgagccggaaagctcagctagaggaaga
aggagcctaggtcccctggcagccgcagagcccgcggtaatcgccgagtgcaagacgcgc
acagaggtgttccagatctcgcggaacctcatcgatcgcaccaacgccaacttcctggtg
tggccgccctgcgtggaggtgcagcgctgctcgggctgctgcaacaaccgcaacgtgcag
tgccgggcctcgcaggtgcagatgcggccggtgcaggtgagaaagattgagattgtgcgg
aagaaaccgatcttcaagaaggccacagtgaccctggaggaccacctggcctgcaagtgt
gagacagtagtgacccctcggcctgtgactcgaagtcctggaacatcccgggagcaacga
gccaagacgcctcaaactcgggtgaccgttcggacggtgcgcgtccgccggcccctcaaa
gggaagcttcgaaaatttaaacacacacatgacaaggaggcattgaaggagaccctcggg
gcctag

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