Peromyscus maniculatus bairdii (prairie deer mouse): 102927136
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Entry
102927136 CDS
T11302
Symbol
Vcl
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04510
Focal adhesion
pmav04520
Adherens junction
pmav04670
Leukocyte transendothelial migration
pmav04810
Regulation of actin cytoskeleton
pmav04820
Cytoskeleton in muscle cells
pmav05100
Bacterial invasion of epithelial cells
pmav05146
Amoebiasis
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102927136 (Vcl)
04520 Adherens junction
102927136 (Vcl)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102927136 (Vcl)
04810 Regulation of actin cytoskeleton
102927136 (Vcl)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
102927136 (Vcl)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
102927136 (Vcl)
09174 Infectious disease: parasitic
05146 Amoebiasis
102927136 (Vcl)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmav04812
]
102927136 (Vcl)
04147 Exosome [BR:
pmav04147
]
102927136 (Vcl)
Cytoskeleton proteins [BR:
pmav04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102927136 (Vcl)
Exosome [BR:
pmav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102927136 (Vcl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
102927136
NCBI-ProteinID:
XP_006984833
Ensembl:
ENSPEMG00000020400
UniProt:
A0A6I9LJ23
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Position
9:complement(39607083..39706586)
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AA seq
1134 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL
DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE
LCDDPKERDDILRSLGEIAALTSKLGDLRRQGKGDSPEARALAKQVATALQNLQTKTNRA
VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKAAAVGTANKSTVEG
IQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP
DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM
AARQLHDEARKWSSKPGTPAAQVGIGVVAEADAADAVGFPFPSDMEDDYEPELLLMPSNQ
PVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAK
DIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNIS
DEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcacacgcgcacgatcgagagcatcctggagccggtggcgcagcagatc
tcgcacctggtgatcatgcacgaggaaggcgaggtggacggcaaagccattcctgacctc
accgcgcccgtggccgccgtgcaggcggccgtcagcaacctcgtccgggtcggaaaagag
acagttcagaccaccgaggatcagattttgaagagagacatgccaccagcatttattaag
gttgagaatgcttgcaccaagcttgttcaggcagcccagatgcttcaggctgacccatac
tccgttcctgcgcgggattacctcattgatgggtctaggggaatcctttctggcacgtca
gacctacttcttacctttgatgaggctgaggttcgtaaaattattagagtttgcaaagga
attttggaatatcttacagtggcggaggtagtggagactatggaagatttggtcacttac
acaaagaatcttgggccagggatgacgaagatggccaaaatgattgatgagagacagcag
gaactgactcaccaggagcaccgagtgatgctggtgaactcaatgaacaccgtcaaagag
ctccttcccgttctcatttcagctatgaagatttttgttacaactaaaaactcaaaaaac
caaggaatagaagaagctttgaaaaatcgaaattttactgtagaaaaaatgagtgctgaa
attaatgagatcattcgtgtattacaactcacttcttgggatgaagatgcctgggccagc
aaggacaccgaagccatgaagagagcgctggcgtccatagactccaaactgaaccaggcc
aaaggttggctccgggaccccagtgcctccccaggggacgccggggagcaggccatcagg
cagatcttagatgaagctggaaaagttggtgaactctgtgcaggcaaggaacgcagggag
atcctgggaacctgcaaaatgctagggcagatgactgaccaggtggctgacctccgagcc
agaggacaaggagcctcgccagtggccatgcagaaggcccagcaggtgtctcagggtctc
gacgtgctcactgcgaaagtggaaaatgcagctcgaaagctggaagccatgacaaactca
aagcagagtattgcgaagaagatcgatgctgcccagaattggcttgcagatccaaatggt
ggacctgaaggagaagaacagattcgaggggctctagctgaagctcggaagattgcagag
ttatgtgacgaccctaaggagagagatgacatcctacgctcccttggagagatagctgct
ctgacctctaaattgggagatttacgaagacaggggaaaggagactccccagaggcgcga
gcattagctaagcaggtggccacggccttgcagaacctgcagaccaaaaccaacagggct
gtggccaacagcagacctgccaaggcagcggtccacctcgagggcaagatcgaacaagca
cagcgctggattgataatcctaccgtggatgaccgtggagtcggtcaggccgccatccgt
ggacttgtggctgaggggcatcggctggccaatgtcatgatgggaccctatcgccaagat
cttcttgccaagtgtgaccgtgtcgatcagctaacagcccagctggctgacctggctgcc
cgaggggaaggggagagtcctcaggcgagagcacttgcttcccagctccaagactcctta
aaggatcttaaagctcagatgcaggaagctatgactcaagaggtgtccgatgttttcagc
gataccacaactcccatcaagctgctggcggtggcggccacagctcctcctgatgcaccc
aatcgggaagaggtctttgatgagagggcagccaactttgaaaaccattccggaaggctt
ggggccaccgcggagaaggcggctgctgttggtactgccaataaatcaacggtggaaggc
attcaggcgtcagtgaagacagcccgggaactcactccccaggtcatctctgctgctcga
atcttactgaggaaccccggaaatcaagccgcttatgaacattttgagaccatgaagaac
cagtggattgataatgttgaaaagatgacagggctggtggacgaggctattgataccaaa
tctctgttggatgcttctgaagaagcaattaaaaaagacctggacaagtgtaaggtagcc
atggctaatattcagcctcagatgctggtagctggagcaaccagcattgcgcgtcgggcc
aaccggatcctgctggttgctaagagggaggtggagaactctgaggacccgaagttccgt
gaggctgtgaaagctgcctctgatgaattaagcaagaccatctccccaatggtgatggat
gccaaggcagtggctggaaacatttctgaccctggcctgcaaaagagcttcctggactca
ggataccggatcctgggagccgtggccaaggtcagagaagccttccagcctcaggagcct
gacttcccgcctcctccaccagaccttgaacagctccgactaactgatgagcttgctcct
cctaaaccaccgctgcctgagggtgaagtccctccacccaggcccccacccccagaagag
aaggatgaggagttccccgagcagaaagctggggaggtgatcaaccagcccatgatgatg
gccgccaggcagctccatgacgaggctcggaagtggtctagcaagccgggtaccccagcc
gctcaggtgggtataggagttgtagctgaggcagatgcggctgatgctgttgggttccct
tttccctctgacatggaagacgattacgaacctgagctgctgttaatgccatctaatcag
ccggtcaaccagcccattctggccgcggctcagtccttgcatcgggaagctaccaagtgg
tctagtaagggcaacgacatcattgcagcagccaagcgcatggctctgctgatggcggag
atgtcccggctggtaagagggggtagtggtaccaagcgggcacttattcagtgtgccaag
gacatcgctaaggcctctgatgaggtgactcggctggccaaggaggttgccaagcagtgc
acagataagcggattagaaccaatctcttacaggtatgtgagcgaatcccaactataagc
acccagctcaaaatcctgtccacagtgaaggctaccatgctgggccggaccaacatcagt
gacgaggaatccgagcaggccacggagatgctggttcataatgcccagaacctcatgcag
tctgtgaaggagactgtgcgagaagcagaagcagcttcaatcaaaattcgaacagatgct
ggatttactctgcgctgggtcagaaagactccctggtaccagtag
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