Peromyscus maniculatus bairdii (prairie deer mouse): 102927289
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Entry
102927289 CDS
T11302
Symbol
Preb
Name
(RefSeq) guanine nucleotide-exchange factor SEC12 isoform X1
KO
K14003
prolactin regulatory element-binding protein
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102927289 (Preb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmav04131
]
102927289 (Preb)
Membrane trafficking [BR:
pmav04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
102927289 (Preb)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
WDR55
Beta-prop_TEP1_2nd
EIF3I
WDR90_beta-prop_4th
WD40_Gbeta
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_DCAF12
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
102927289
NCBI-ProteinID:
XP_006995599
Ensembl:
ENSPEMG00000015929
UniProt:
A0A6I9MHZ2
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Position
22:complement(17259271..17263750)
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AA seq
418 aa
AA seq
DB search
MGRRRGVELYRAPFPLYALRVDPKTGLLIAAGGGGAAKTGIKNGVHFLQLEQINGCLSAS
LLHSHDTETRATMNLALAGDILAAGQDARCQLLRFQVHQQKSNKAEKSSSKEQGPRQRKG
AAPAEKKPAAEAHREGVELKVKNLEAVQTDFSTEPLQKVVRFNHDNTLLATGGTDGHVRV
WKVPSLEKVLDFKAHEGEIGDLALGPDGKLVTVGWDLKASVWQKGQLVTQLHWQENGPTS
SSSTPYRYQACRFGQVPDQPGGLRLFTVQIPHKRLRQPPPCYLTAWDSSSYLPLRTRSCG
HEVISCLSVSESGTFLGLGTVTGSVAIYIAFSLQRLYYVKEAHGIVVTDVAFLPEKGCGP
ELLGPHETALFSVAVDSRCQLHLLPSRRSVPVWLLLLMCVGLIIVTILLLQSAFPGFL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgggccggcgccggggtgtggagctctaccgggccccgttcccgttgtacgcgctccgg
gtggaccccaagaccgggctgctcatcgctgcgggcggaggaggcgccgccaagaccggc
ataaagaatggcgtgcactttctgcagctagagcaaatcaatgggtgcctgagcgcctcc
ttgctgcactctcatgacacggagacacgggccactatgaacctggcactggccggtgac
atccttgctgctggacaggatgcccgatgtcagcttctgcgattccaggtccatcaacag
aagagcaataaagccgagaagtcaagttccaaggagcagggacctcgacagaggaagggg
gccgctccagcggagaagaagccagcagcagaagctcaccgagagggggttgaactcaaa
gtaaagaatttggaggcagtccagacagacttcagcactgagccgctgcagaaagttgta
cgcttcaaccacgacaataccctgctcgccacgggagggactgatggccacgtccgtgtc
tggaaggtacctagcctggagaaagttctggatttcaaagcgcatgaaggggagattgga
gatttggcgttgggtcctgatggcaagctggtcactgtgggctgggacctgaaggcctcc
gtgtggcagaaaggccagttagtgacgcagctgcattggcaagagaatggacccacctct
tcttccagcacaccgtaccgctaccaggcctgcagatttgggcaggttccagatcagcct
ggcgggctgcggctcttcacggtgcagatcccccacaagcgcctgcgccagcccccaccc
tgctacctcacagcctgggacagctcctcgtacttgccgcttcggacccggtcctgtggc
catgaagtcatctcctgcctcagtgtcagtgaatcgggtaccttcctaggcctaggcacg
gtcaccggctctgtcgccatctacatagctttctctctccagcgcctctattacgtgaag
gaggcccatggcattgtggtgaccgatgtggcctttctgcctgagaagggctgtggtcca
gagcttcttgggccccatgaaactgctcttttctctgtggccgtggatagtcgttgtcag
ctgcacctgctgccctcacggcggagcgttcctgtatggctcctgctcctgatgtgtgtc
ggccttattattgtgaccatcctgctgctccagagtgcctttccaggtttcctttag
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