Peromyscus maniculatus bairdii (prairie deer mouse): 102927484
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Entry
102927484 CDS
T11302
Symbol
Mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102927484 (Mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmav04121
]
102927484 (Mid1)
Enzymes [BR:
pmav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102927484 (Mid1)
Ubiquitin system [BR:
pmav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102927484 (Mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
FN3_DSCAM-DSCAML_C
TRIM_CC
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_2
zf-RING_5
NDNF
Motif
Other DBs
NCBI-GeneID:
102927484
NCBI-ProteinID:
XP_006994388
Ensembl:
ENSPEMG00000008470
LinkDB
All DBs
Position
X:121355942..121692705
Genome browser
AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESISAFQCPTCR
HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMSSAEKVLCQ
FCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQRRQIIGTKIKEGKVMRLRKLAQQIA
NCKQCIERSASLISQAEHSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFSREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFMVKAINQAGSRSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDESSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGLAYKSAPKHEWIGKNSASWALCRCNNNWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSIAFYDALNSIHLYTFDVALSQPVCPTFTVWNKCLTIITGLPIPDHL
DCTEQLP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgccctatttgtctagagctctttgaagaccct
ctcctgctgccctgtgcacatagcctctgcttcaactgcgcccaccgtattctggtctct
cactgtgccaccaacgagcctgtggagtccatcagcgccttccagtgccccacctgccgg
catgtcatcacgctcagccagcgaggtctagacgggctcaagcgcaacgtcaccctacaa
aacatcattgacaggtttcagaaagcatctgtgagcgggcccaattctcccagtgagacc
cgcagggagcgggcctttgacgccaacaccatgtcctctgccgagaaggttctctgccag
ttctgtgaccaggatcctgcccaggatgctgtgaagacctgtgtcacttgcgaagtgtcc
tactgcgatgagtgcctaaaagccactcacccgaacaagaagccctttacaggccatcgt
ctgattgagccaatcccggactcgcacatccgggggctgatgtgcctggagcacgaggat
gagaaggtgaatatgtactgtgtgaccgatgaccagttaatctgtgccttgtgtaaactg
gttgggcggcaccgcgatcatcaggtggcagctttgagtgagcgctatgacaaattgaag
caaaacttggagagcaatctcaccaatctcattaagaggaatacagaactggagaccctt
ttggctaaactcatccaaacctgtcaacatgttgaagtcaatgcatcacgtcaagaggcc
aaattgacagaagaatgtgatcttctcattgagatcattcagcaaagacgacaaattatt
ggaacgaagattaaagaaggaaaggtgatgaggctccgcaaactagctcagcagattgca
aactgtaaacagtgcattgaaaggtcggcatcactcatttcccaagcggaacactctctg
aaggagaatgaccatgcccgctttctccagacagcaaagaatatcactgagagagtctcc
atggcaactgcatcctcccaggtcctaattcctgaaatcaacctcaatgacacatttgac
acttttgccttagatttttctcgggagaagaaactgctagaatgtctggattaccttaca
gctcccaaccctcccacaattagagaagagctctgcacggcttcctatgacaccatcact
gttcactggacttcggatgatgagttcagtgtggtctcctatgaactccagtacaccata
ttcactggacaagccaatgttgttagtctgtgtaactcagctgatagctggatgattgtg
cccaacatcaagcagaaccactacactgtgcatggcctacaaagtggcaccaagtatatc
ttcatggtcaaggccatcaaccaggcaggcagccgcagtagtgagcctgggaagttgaag
acaaatagtcagccgtttaaactggatcccaaatctgctcaccgaaaactgaaggtgtcc
catgataacctgactgtagaacgagatgagtcatcatccaaaaagagtcacacaccagaa
cgcttcactagccaagggagctatggagtggctggaaacgtgttcattgatagtggccgg
cattactgggaagtggtcataagcggaagcacatggtacgccattggccttgcatacaaa
tcagcccccaaacatgaatggattgggaagaattctgcttcctgggccctctgccgctgc
aacaataactgggtggttaggcataacagcaaggaaatacccattgagccagccccccac
ctccggcgcgtaggcatcctactggactatgataatggttccatcgctttttatgatgct
ttgaactccatccacctctacacctttgatgtggcgctttcacagcctgtgtgccccacc
tttactgtgtggaacaagtgtttgacgattataacgggccttcccatcccagaccatttg
gactgtacagaacagctgccttga
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