Peromyscus maniculatus bairdii (prairie deer mouse): 102927648
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Entry
102927648 CDS
T11302
Symbol
Nup43
Name
(RefSeq) nucleoporin Nup43
KO
K14305
nuclear pore complex protein Nup43
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03013
Nucleocytoplasmic transport
pmav05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102927648 (Nup43)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102927648 (Nup43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmav03019
]
102927648 (Nup43)
03036 Chromosome and associated proteins [BR:
pmav03036
]
102927648 (Nup43)
Messenger RNA biogenesis [BR:
pmav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102927648 (Nup43)
Chromosome and associated proteins [BR:
pmav03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102927648 (Nup43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EIPR1
WD40
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_Gbeta
WD_LRWD1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_SPT8
Beta-prop_CAF1B_HIR1
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
102927648
NCBI-ProteinID:
XP_006984514
Ensembl:
ENSPEMG00000022692
UniProt:
A0A6I9LTV0
LinkDB
All DBs
Position
16:complement(51122594..51136718)
Genome browser
AA seq
380 aa
AA seq
DB search
MEEIYAKFVSQKISKTRWRPVPSGSLQTAETFATGSWDNEENCVSLWSIGDFGNLDSDGG
FEGDHQLLCDIRHHGDVMDLQFFDQERIVAASSTGCVTVFLHHPNNQTLSVSQQWPAAHH
HTGPGSPSYGSAPCTGIVCDNPEIVTVGEDGRINLFRVDHKEAVRTIDNADSSTLHAVTF
LRTPEIVTVNSIGQLKIWDFRQQGSEPCQILSLTGDRVPLHCVDRHPNQQHVVATGGQDG
MLSIWDVRQGTMPVSLLKAHEAEMWEVHFHPSNPDHLFTCSEDGSLWHWDASTNGPEKSS
LFHQGGRSSTFLSHSISNQANVHQSLISSWLSTDPAKDRIEITSLLPSRTLSVNSLDVLG
PCLVCGTDAEAIYVTRQLFS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaatttatgctaagttcgtgtctcagaaaattagcaaaacccgctggcggcca
gtgccttccgggagcctgcagaccgcagagaccttcgctacgggctcttgggacaatgag
gaaaattgcgtctcactgtggtctattggagatttcggaaatttggattctgatggaggg
tttgaaggagaccatcaattgctgtgcgatatcagacatcatggtgatgtcatggatttg
cagttttttgaccaggaaagaattgtagctgcttcgtcaacaggatgtgtaacagtgttc
cttcaccatccaaataaccagaccctgtcagtcagtcagcagtggccggcagctcaccac
cacacaggtcctggcagtccttcctacggcagtgcaccgtgtacagggatcgtgtgtgac
aacccagagattgtcactgtcggagaggatgggcgaataaatctcttcagagtcgatcac
aaggaggccgtaagaacgatagataacgcggacagcagcacactccatgctgtgaccttc
cttcggactcctgagattgttacagtcaactcaatcggacagctaaaaatatgggatttc
agacagcagggaagtgagccctgtcagatactatcactgactggtgaccgagtgccgctc
cactgtgttgacagacatcccaaccagcagcatgttgtagccactggtggccaggacggg
atgttgagtatttgggatgttagacaaggcaccatgcccgtctctttacttaaggctcac
gaggctgaaatgtgggaggtccatttccacccatccaacccggatcatctgtttacttgt
tctgaagatggatccctctggcattgggatgcctccacaaatggacccgaaaagtcttct
ctctttcaccaaggaggaagaagcagtactttcctatctcatagcataagtaaccaagcc
aatgttcaccagtctctaataagttcctggctcagcacagatcctgccaaagaccgaatt
gaaatcacaagcttgcttcctagcaggactctgtctgtaaacagtttggatgttttaggt
ccctgtcttgtttgtgggactgatgcagaagccatttatgttaccagacaactattttca
tga
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integrated database retrieval system
