Peromyscus maniculatus bairdii (prairie deer mouse): 102927773
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Entry
102927773 CDS
T11302
Symbol
Bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X2
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102927773 (Bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmav03019
]
102927773 (Bard1)
04121 Ubiquitin system [BR:
pmav04121
]
102927773 (Bard1)
03036 Chromosome and associated proteins [BR:
pmav03036
]
102927773 (Bard1)
03400 DNA repair and recombination proteins [BR:
pmav03400
]
102927773 (Bard1)
Messenger RNA biogenesis [BR:
pmav03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
102927773 (Bard1)
Ubiquitin system [BR:
pmav04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
102927773 (Bard1)
Chromosome and associated proteins [BR:
pmav03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
102927773 (Bard1)
DNA repair and recombination proteins [BR:
pmav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
102927773 (Bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank_4
Ank
Ank_2
Ank_3
Ank_5
BRCT_2
BRCT
Ank_KRIT1
zf-C3HC4
zf-RING_5
ANK_LRRK2
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
102927773
NCBI-ProteinID:
XP_006972307
Ensembl:
ENSPEMG00000009105
UniProt:
A0A8C8T5P0
LinkDB
All DBs
Position
13:43490359..43564972
Genome browser
AA seq
762 aa
AA seq
DB search
MPRRPPTVRSGNKPSPAPAMEPADAGPWAHSRAALARLESLLRCSRCTNILKEPVCLGGC
EHIFCSVCISDCVGSGCPVCCTPAWILDLKINRQLDSMIQLYSKLQNLLHANKLSDPKDT
TPKASLCGDAEMKKNSIKMWFSPRSKRVRYVVNKVSVKTQPPKAKGDKAQKASMYEFVST
SPPEVVSKRAKTASRTSAKKQPKKASAEINQEGSSRPETEDSRLDSKEELKEERIVCRSP
TPVTESPRVNGEIDLLASGSVAESEYSGSLTEVSLPLAEHIVSPDTVSKNEETPEKKVCV
KDLRSVGRNGNHKGCSRPPNPTSENCGSDVLSPSRDGIKPAALAENPPLVDCSSGQVDVT
LRRNSNMSDDSLSLSPGTPPPLLNNSTHRQMMSSPATVKLSPGVTALKRNHRGETLLHIA
SIKGDIRSVEYLLQNGNDPNVKDHAGWTPLHEACSHGHLKIVELLLQHNALVNTTGYQND
SPLHDAAKNGHVDIVKMLLSYGASRNAVNIFGVRPVDYTDNENIRSLLLLPEKNESFSTS
QCSVVTAGQRRNGPLVLIGSGLSSQQQKMLSKLEALLKAKKCAEFDNTVTHVIVPDGEAQ
STLKCMLGILNGCWLLRFDWVKACLHSKVREQEEKYEVPGGPQRSRLNREQLLPKLFDGC
YFFLAGNFKHHPKDDLLKLIAAAGGKMLSRKPKPDSDVTQTINTVAYHAKPDSDQRFCTQ
YIVYEDLFNCRPERVRQGKVWMAPSTWLISCVMAFELLPLDS
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcaggccgccgacggtccgctcggggaacaagccttctcccgctcccgccatg
gagccggctgacgccgggccctgggcccacagccgcgcggcgctcgcccgcctggagagc
ctgctgcgctgctcccgctgcactaatattctgaaggagcccgtgtgcttaggaggatgt
gagcacatcttctgtagtgtttgtataagcgactgtgttggatcaggatgtccagtgtgt
tgtaccccagcctggatcctagacctcaagataaacagacagttggacagcatgatccag
ctttatagtaagcttcagaatttgctacatgccaataaactttcagatccaaaagacacc
acacccaaggcaagtttatgtggtgacgcagaaatgaagaagaattccataaaaatgtgg
tttagtcctcgcagtaagagggttagatatgttgtgaataaagtgtcagtgaagacccag
cctccaaaggcaaagggtgacaaagcccagaaagcctcaatgtatgaatttgtttccaca
agtccccctgaagttgtttctaagagggctaaaacagcttctcgaacatctgcgaaaaag
cagccgaagaaagcttcagctgagatcaaccaggaggggagttccaggccagagacagag
gatagtagattggattccaaagaggaactgaaggaggaaaggattgtctgccgtagccca
acaccagtcacggaaagtccacgggtgaatggtgaaatcgacttattagcaagtggctct
gttgcagaatctgaatattcgggaagcttgactgaagtgtctttaccattggctgagcat
atagtgtctccagacactgtgagcaagaatgaagagactcctgagaagaaggtctgtgta
aaagatcttcgctcagtagggcgtaatggaaatcacaaaggctgcagcaggcctcccaat
cctacttctgagaattgtgggagcgatgttttgagccccagcagagatggcattaagcca
gccgcgcttgcagaaaacccaccgctggttgactgttcttcagggcaagttgatgtcaca
ctcaggagaaacagtaacatgtcggatgactccctcagcctttcaccaggcacaccccca
cctctgctgaataattcaactcacagacaaatgatgtcaagccccgccacagtgaagctg
tcacccggtgtcacggccttgaaaagaaatcacagaggagagactttgcttcatattgct
tctattaagggcgatatacgttccgttgaatacctcttacaaaatggaaacgacccaaat
gttaaagaccatgctggatggacaccgttgcatgaagcctgcagtcatgggcacctgaag
atagtggaattgctcctccagcataatgctttggtcaacaccacaggctatcagaatgac
tcgccactccacgatgcggccaagaatgggcacgtggacatagtcaagatgttactgtcc
tatggcgcctccaggaatgctgttaacatatttggtgtacggcctgtggattatacagac
aatgaaaatataagatcattattgctgctaccagagaagaatgaatcattctcaactagc
cagtgctcagtcgtgaccgctggacagcgaaggaatgggccgttggtgctgataggcagt
gggctttcttcgcagcagcagaaaatgctcagcaaacttgaggcacttcttaaagctaaa
aaatgtgctgagtttgacaatacagtaacccatgtcattgtgcctgatggtgaggctcaa
agtactctgaagtgcatgctggggattctcaatggatgctggctcctgaggtttgactgg
gtgaaagcctgtctgcacagcaaagtacgtgaacaggaagaaaagtatgaagttcctgga
ggtccacagaggagcaggctcaacagagagcagctgttgccaaagctgtttgatggctgc
tacttctttttggcgggaaacttcaaacatcatccaaaggatgacctccttaagctcatt
gccgcagcaggaggcaagatgctcagtagaaagcccaagccagacagtgatgtgactcag
accatcaacacagttgcgtaccatgccaaacctgattctgaccagcgcttctgtacccaa
tacatcgtctatgaagatctgtttaattgtcgcccagaaagggttcggcagggcaaagtc
tggatggctccttccacctggcttatcagctgtgtaatggcctttgaattgctgcctctt
gacagctga
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