Peromyscus maniculatus bairdii (prairie deer mouse): 102927883
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Entry
102927883 CDS
T11302
Symbol
Sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04517
IgSF CAM signaling
pmav04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102927883 (Sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102927883 (Sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmav04812
]
102927883 (Sptbn1)
Cytoskeleton proteins [BR:
pmav04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102927883 (Sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
102927883 (Sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
PH_11
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
102927883
NCBI-ProteinID:
XP_006993256
Ensembl:
ENSPEMG00000023403
UniProt:
A0A6J0CIN9
LinkDB
All DBs
Position
10:complement(32316893..32491888)
Genome browser
AA seq
2363 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASVQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERII
YIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEITNYRPTIDTLHEQASALPQAHAVSPDVRGRLAGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIRAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKHNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITDSSSLNA
EAIRQRLADLKQLWGLLIEETEKRHRRLEEAHRAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLY
AGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGNIGQERVDTVNHMADDLINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQV
RQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACEGRRVRLVDTGDKFRFFSMV
RDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLAR
KHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYL
SSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRP
PSPEPSTKVSEETESQQWDTSKGDQVSQNGLPAEQGSPRMAETTDTNEMVNGAAEQRTSS
KESSPIPSPTSDRKAKSALPAQSAATLPARTQETPAAQMEGFLNRKHEWEAHNKKASSRS
WHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVTLKEAVCEVALDYKKKKHVFKLRLND
GNEYLFQAKDDEEMNTWIQAISSAISSDKHDMSASTQSTPASSRAQTLPTSVVTITSESS
PGKREKDKEKDKEKRFSLFGKKK
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacagtagccacagactatgacaacattgagatccagcagcagtacagcgat
gtcaacaaccgctgggatgtggatgactgggacaatgaaaacagctctgcacggctcttt
gagcggtcccgtatcaaggctctggcagatgagcgtgaagccgtacagaagaagaccttt
accaagtgggtcaactcccaccttgcccgagtgtcctgccgaatcacagacctgtacacc
gaccttcgagatggacggatgctcatcaagctcctggaggtcctctccggagaaaggctg
cctaaacccacgaagggacggatgcgcatccactgtctggagaatgtagacaaggccctt
cagttcctgaaggagcagagagtccatcttgagaacatgggttcccatgacattgtggat
gggaaccaccggctgaccctcggactcatctggaccatcatcctgcgcttccagatccag
gatatcagtgtagagacggaagataacaaagagaaaaagtctgccaaggatgcattgctg
ctgtggtgccagatgaagacagctgggtaccccaatgtcaacatccacaatttcaccact
agctggagggatggcatggccttcaatgcactgatacacaaacaccggcctgacctgata
gattttgataaactgaagaaatccaacgcacactacaatctgcaaaatgcgtttaacctg
gcagagcagcaccttggcctcacaaaactgttagaccctgaagatatcagcgtggaccac
cctgatgagaagtccatcatcacatatgtggtcacctactaccactacttctctaagatg
aaggccttggcagtcgaagggaagcgcattgggaaggtgcttgataatgctattgaaaca
gagaaaatgattgagaagtatgaatcacttgcctctgacctcctggagtggattgaacaa
accatcatcattctgaacaatcgcaaatttgctaattcactggttggagtccagcagcag
cttcaggcattcaacacttaccgcacagtggagaaaccacctaagtttactgagaagggg
aatttggaggtgctgcttttcacaattcagagcaagatgagagctaataaccagaaggtc
tacatgccccgagaagggaagctcatctctgatatcaacaaggcctgggaaagactggaa
aaagcagaacacgagcgagagctggctctgcgcaatgagctcataaggcaggaaaaactg
gaacagcttgcccgaagattcgatcgcaaggcagctatgagggagacatggctgagcgaa
aaccagcgtctggtgtctcaggacaactttggatttgaccttcccgcagttgaggctgcc
accaaaaaacatgaggccattgagacggacatcgccgcatatgaagaacgcgttcaggct
gtggtggctgtggccagggaacttgaagcagagaactaccatgacatcaagcgcattaca
gccaggaaggacaatgtcatccggctctgggagtacttgctggaattgctcagggccagg
aggcagcgcctggagatgaacctggggctgcaaaagatattccaggaaatgctttacatt
atggactggatggatgaaatgaaggtgctattgctgtctcaagactatggcaaacacttg
ctcggtgtagaagacttgttacagaagcacgccttggttgaagcagacattgcaatccaa
gcagagcgtgtaagaggtgtgaatgcctctgtccagaaatttgcaacagatggggaaggc
tacaagccctgtgacccccaggtcatccgagaccgcgttgcccacatggagttctgctat
caagagctttgtcagctggctgcggagcggagggctcgcctggaagagtcccgtcgcctc
tggaagtttttctgggagatggcagaagaggaaggctggatacgggagaaggagaaaatc
ctgtcctctgatgattatgggaaagacttgaccagtgtcatgcgcctgctgagcaagcac
cgggcatttgaggatgagatgagtggtcgtagtggccactttgagcaggccatcaaagaa
ggtgaagacatgattgcagaggaacactttggatcagaaaagatccgtgaaagaatcatt
tacatccgggagcagtgggccaacctggagcagctctcagccatccgtaagaagcgccta
gaggaggcttcattactgcaccagttccaggctgatgctgacgacatcgacgcttggatg
ctagatatcctcaagatcgtctccagcaatgacgtgggccatgatgagtactccacacag
tctctggtcaagaagcataaagatgtagcagaagagatcactaactacaggcccactatt
gacacactgcatgagcaagccagtgcccttccccaggcacatgcagtgtctccagatgtg
aggggccgcctggcaggaattgaggagcgctacaaggaggtggcagagctaacacggcta
aggaagcaggctctgcaggacaccctggccctgtacaagatgttcagcgaggccgatgcc
tgcgagctctggattgatgagaaggaacagtggctcaacaacatgcagatcccagagaag
ctggaagacctggaagtcatccagcacagatttgagagcctagaacccgaaatgaacaac
caggcctcccgggttgccgtggtgaaccagattgctcggcagctgatgcacagtggccac
cccagtgagaaggaaatcagagctcagcaggacaaactcaacacgaggtggagtcagttc
agagagctggtggacaggaaaaaggatgctctgctgtctgccctgagcatccagaactac
cacctcgagtgtaacgaaaccaagtcctggatccgggaaaagaccaaggtcattgagtcc
acccaagaccttggcaacgacctggcaggtgtcatggccctgcagcgcaagctgactggc
atggaacgagacttggtggccattgaggcgaagctgagcgacctgcagaaggaagccgag
aagctggagtctgagcaccctgaccaggctcaagccatcctgtctcggctggccgagatc
agtgatgtgtgggaggaaatgaagacaaccctgaagaatcgcgaggcctccctgggggag
gccagcaaactgcagcagttcctgcgggacttggatgacttccagtcctggctctccagg
acccagactgctatcgcctcagaggatatgcccaacaccctgactgaggcagagaagctt
ctcacacagcatgagaacatcaaaaatgagattgacaattatgaggaagactaccagaag
atgagggacatgggtgagatggtcacccagggacagaccgatgcccagtacatgtttctg
cggcagcggttacaggccttagacactggctggaatgagctccacaaaatgtgggagaac
agacaaaatcttctctcccagtcccatgcctaccagcagttccttcgggacacgaaacaa
gctgaagctttccttaataaccaggagtatgttttggctcatactgaaatgcccaccacc
ttggaaggagctgaagcagctattaaaaaacaagaggacttcatgaccaccatggatgcc
aacgaggagaagatcaatgctgttgtggagacgggcagaaggctggtgagcgatggaaac
atcaactcagatcgcatccaggagaaggtggactctattgatgacaggcacaggaagaat
agagaggcagccagtgaacttctgatgagattgaaggataaccgagatctacagaaattc
ctgcaagactgtcaggagctgtccctctggatcaatgaaaagatgctcacagcccaggac
atgtcttatgatgaagccaggaaccttcacagcaaatggctaaagcatcaggcgtttatg
gcagaacttgcatccaacaaagaatggctggacaagattgagaaggaaggaatgcagctc
atttcagaaaagccagaaacagaagctgtggtgaaggagaaactcactggtttacataaa
atgtgggaagtccttgaatccaccacccagaccaaggcccagcggctctttgatgcaaat
aaggctgagctgttcacacagagctgtgcagatctagacaagtggctccatggcctggag
agccagattcagtctgacgactatggcaaagaccttactagcgtcaatattcttctgaaa
aagcaacagatgctagagaatcagatggaagtgcggaagaaggagatcgaggaactccag
agccaagcccaggcactgagtcaggaggggaagagtaccgatgaggtggacagcaagcgc
ctcactgtgcagaccaagttcatggaacttctggagcccttgaatgagaggaagcataat
ctgttagcttccaaggagatccatcagttcaacagggatgtggaggacgaaattctgtgg
gttggcgagaggatgcctttggcaacttccacagatcatggccataaccttcaaactgtg
caactgttaataaagaaaaatcagaccctccagaaagaaatccagggacaccagcctcgt
attgatgacatctttgagaggagtcaaaacatcatcacagatagcagcagcctcaatgcc
gaagcgatcaggcagaggctggccgacctgaagcagctgtgggggcttcttattgaggag
actgagaagcgccacaggcggctggaggaggcccacagggcccagcaatactactttgat
gcagctgaagcagaagcctggatgagtgagcaggaactgtatatgatgtctgaggaaaaa
gccaaggatgagcaaagtgctgtctccatgttgaaaaagcatcagattttggaacaggct
gttgaggactatgcagagacagtacaccagctctccaaaactagccgagccctggtagct
gacagccatcctgaaagtgagcgtattagcatgcggcagtcaaaagtggataagctatac
gctggcctgaaggatcttgctgaagaaaggagaggaaaacttgacgagaggcacaggctg
ttccagctcaacagggaggttgacgacctggagcagtggattgctgagagggaagtggtc
gcagggtcccatgagttgggacaggactatgagcatgtcacgatgttacaagaacggttc
cgagaatttgctcgagacacaggaaacattgggcaggagcgtgtggatacagtcaatcat
atggcagatgacctcatcaactctggacattcagatgctgccaccattgctgagtggaaa
gatggtctcaatgaagcctgggctgacctcctggagctcattgacacgagaacacagatt
cttgctgcctcctatgaactgcataagttttaccatgatgccaaggagatctttggccgc
atccaggacaaacacaagaaactccctgaggagcttggaagagatcagaacacagtggag
accttacagagaatgcacaccacctttgagcatgacatccaggctctgggcactcaggtg
aggcagctgcaagaggatgcagcccgcctccaggcagcctacgcgggggacaaggccgat
gacatccagaagcgtgagaatgaggttctggaagcctggaagtccctgctggatgcttgt
gagggtcgcagggtgcggctagtggacacgggagacaagttccgcttcttcagcatggtg
cgtgacctcatgctctggatggaagatgtcatccggcagattgaggcccaggagaaacca
cgggatgtgtcatctgttgaactgttaatgaataatcatcaaggtatcaaagctgaaatt
gatgctcgcaatgacagttttacaacttgcattgaacttgggaaatccctgctggcaagg
aaacactatgcttctgaggagatcaaggaaaagttactgcagttgacggaaaaaagaaaa
gaaatgattgacaagtgggaagaccgatgggaatggttaagactgattttggaggtccat
cagttctcaagggatgccagtgtggctgaggcttggctgcttgggcaggagccatacctg
tccagccgcgaaattggccagagtgtggatgaagtggagaagctcatcaagcgccacgag
gcatttgaaaagtctgcagcaacctgggatgagagattctctgccctggaaagattgaca
acattggagctactggaagtgcgaagacagcaagaggaagaagaaagaaagaggcggccg
ccttctccagagccaagcacgaaggtctcagaggagactgagtcccagcaatgggatact
tcaaaaggagaccaagtttcccagaatggtttgccggctgaacagggatctccacggatg
gcagaaaccacggacacaaatgaaatggtcaacggtgctgcagagcagagaacaagctcc
aaagagtccagtcccattccctctcccacctctgaccgcaaggccaaatctgcacttcca
gcccagagtgctgccaccctgccagccaggacacaagagacaccggcggcccagatggaa
ggcttcctcaatcggaagcacgagtgggaggcccacaataagaaagcctcgagcaggtcc
tggcacaatgtctattgtgtcataaataaccaagaaatgggcttctataaagatgccaag
agtgctgcttctggcatcccctaccacagtgaggtccctgtgactttgaaagaggctgtc
tgtgaagtggcccttgattacaagaagaagaagcatgtgttcaagctaagactaaatgat
ggcaatgagtacctcttccaagccaaagatgacgaggaaatgaacacatggatccaggcc
atctcctccgccatctcctctgacaaacatgacatgtccgccagcacccagagtacgcca
gcatccagccgggcgcagaccttgcccaccagcgtcgtcaccatcaccagcgagtctagt
cccggcaagagggagaaggacaaagagaaagacaaagagaagcggttcagcctttttggc
aaaaagaagtga
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integrated database retrieval system
