Peromyscus maniculatus bairdii (prairie deer mouse): 102927883
Help
Entry
102927883 CDS
T11302
Symbol
Sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102927883 (Sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmav04812
]
102927883 (Sptbn1)
Cytoskeleton proteins [BR:
pmav04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102927883 (Sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
102927883 (Sptbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
102927883
NCBI-ProteinID:
XP_006993256
Ensembl:
ENSPEMG00000023403
UniProt:
A0A6J0CIN9
LinkDB
All DBs
Position
10:complement(32316893..32491888)
Genome browser
AA seq
2363 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASVQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERII
YIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEITNYRPTIDTLHEQASALPQAHAVSPDVRGRLAGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIRAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLNERKHNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITDSSSLNA
EAIRQRLADLKQLWGLLIEETEKRHRRLEEAHRAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLY
AGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGNIGQERVDTVNHMADDLINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQV
RQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACEGRRVRLVDTGDKFRFFSMV
RDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLAR
KHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYL
SSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRP
PSPEPSTKVSEETESQQWDTSKGDQVSQNGLPAEQGSPRMAETTDTNEMVNGAAEQRTSS
KESSPIPSPTSDRKAKSALPAQSAATLPARTQETPAAQMEGFLNRKHEWEAHNKKASSRS
WHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVTLKEAVCEVALDYKKKKHVFKLRLND
GNEYLFQAKDDEEMNTWIQAISSAISSDKHDMSASTQSTPASSRAQTLPTSVVTITSESS
PGKREKDKEKDKEKRFSLFGKKK
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacagtagccacagactatgacaacattgagatccagcagcagtacagcgat
gtcaacaaccgctgggatgtggatgactgggacaatgaaaacagctctgcacggctcttt
gagcggtcccgtatcaaggctctggcagatgagcgtgaagccgtacagaagaagaccttt
accaagtgggtcaactcccaccttgcccgagtgtcctgccgaatcacagacctgtacacc
gaccttcgagatggacggatgctcatcaagctcctggaggtcctctccggagaaaggctg
cctaaacccacgaagggacggatgcgcatccactgtctggagaatgtagacaaggccctt
cagttcctgaaggagcagagagtccatcttgagaacatgggttcccatgacattgtggat
gggaaccaccggctgaccctcggactcatctggaccatcatcctgcgcttccagatccag
gatatcagtgtagagacggaagataacaaagagaaaaagtctgccaaggatgcattgctg
ctgtggtgccagatgaagacagctgggtaccccaatgtcaacatccacaatttcaccact
agctggagggatggcatggccttcaatgcactgatacacaaacaccggcctgacctgata
gattttgataaactgaagaaatccaacgcacactacaatctgcaaaatgcgtttaacctg
gcagagcagcaccttggcctcacaaaactgttagaccctgaagatatcagcgtggaccac
cctgatgagaagtccatcatcacatatgtggtcacctactaccactacttctctaagatg
aaggccttggcagtcgaagggaagcgcattgggaaggtgcttgataatgctattgaaaca
gagaaaatgattgagaagtatgaatcacttgcctctgacctcctggagtggattgaacaa
accatcatcattctgaacaatcgcaaatttgctaattcactggttggagtccagcagcag
cttcaggcattcaacacttaccgcacagtggagaaaccacctaagtttactgagaagggg
aatttggaggtgctgcttttcacaattcagagcaagatgagagctaataaccagaaggtc
tacatgccccgagaagggaagctcatctctgatatcaacaaggcctgggaaagactggaa
aaagcagaacacgagcgagagctggctctgcgcaatgagctcataaggcaggaaaaactg
gaacagcttgcccgaagattcgatcgcaaggcagctatgagggagacatggctgagcgaa
aaccagcgtctggtgtctcaggacaactttggatttgaccttcccgcagttgaggctgcc
accaaaaaacatgaggccattgagacggacatcgccgcatatgaagaacgcgttcaggct
gtggtggctgtggccagggaacttgaagcagagaactaccatgacatcaagcgcattaca
gccaggaaggacaatgtcatccggctctgggagtacttgctggaattgctcagggccagg
aggcagcgcctggagatgaacctggggctgcaaaagatattccaggaaatgctttacatt
atggactggatggatgaaatgaaggtgctattgctgtctcaagactatggcaaacacttg
ctcggtgtagaagacttgttacagaagcacgccttggttgaagcagacattgcaatccaa
gcagagcgtgtaagaggtgtgaatgcctctgtccagaaatttgcaacagatggggaaggc
tacaagccctgtgacccccaggtcatccgagaccgcgttgcccacatggagttctgctat
caagagctttgtcagctggctgcggagcggagggctcgcctggaagagtcccgtcgcctc
tggaagtttttctgggagatggcagaagaggaaggctggatacgggagaaggagaaaatc
ctgtcctctgatgattatgggaaagacttgaccagtgtcatgcgcctgctgagcaagcac
cgggcatttgaggatgagatgagtggtcgtagtggccactttgagcaggccatcaaagaa
ggtgaagacatgattgcagaggaacactttggatcagaaaagatccgtgaaagaatcatt
tacatccgggagcagtgggccaacctggagcagctctcagccatccgtaagaagcgccta
gaggaggcttcattactgcaccagttccaggctgatgctgacgacatcgacgcttggatg
ctagatatcctcaagatcgtctccagcaatgacgtgggccatgatgagtactccacacag
tctctggtcaagaagcataaagatgtagcagaagagatcactaactacaggcccactatt
gacacactgcatgagcaagccagtgcccttccccaggcacatgcagtgtctccagatgtg
aggggccgcctggcaggaattgaggagcgctacaaggaggtggcagagctaacacggcta
aggaagcaggctctgcaggacaccctggccctgtacaagatgttcagcgaggccgatgcc
tgcgagctctggattgatgagaaggaacagtggctcaacaacatgcagatcccagagaag
ctggaagacctggaagtcatccagcacagatttgagagcctagaacccgaaatgaacaac
caggcctcccgggttgccgtggtgaaccagattgctcggcagctgatgcacagtggccac
cccagtgagaaggaaatcagagctcagcaggacaaactcaacacgaggtggagtcagttc
agagagctggtggacaggaaaaaggatgctctgctgtctgccctgagcatccagaactac
cacctcgagtgtaacgaaaccaagtcctggatccgggaaaagaccaaggtcattgagtcc
acccaagaccttggcaacgacctggcaggtgtcatggccctgcagcgcaagctgactggc
atggaacgagacttggtggccattgaggcgaagctgagcgacctgcagaaggaagccgag
aagctggagtctgagcaccctgaccaggctcaagccatcctgtctcggctggccgagatc
agtgatgtgtgggaggaaatgaagacaaccctgaagaatcgcgaggcctccctgggggag
gccagcaaactgcagcagttcctgcgggacttggatgacttccagtcctggctctccagg
acccagactgctatcgcctcagaggatatgcccaacaccctgactgaggcagagaagctt
ctcacacagcatgagaacatcaaaaatgagattgacaattatgaggaagactaccagaag
atgagggacatgggtgagatggtcacccagggacagaccgatgcccagtacatgtttctg
cggcagcggttacaggccttagacactggctggaatgagctccacaaaatgtgggagaac
agacaaaatcttctctcccagtcccatgcctaccagcagttccttcgggacacgaaacaa
gctgaagctttccttaataaccaggagtatgttttggctcatactgaaatgcccaccacc
ttggaaggagctgaagcagctattaaaaaacaagaggacttcatgaccaccatggatgcc
aacgaggagaagatcaatgctgttgtggagacgggcagaaggctggtgagcgatggaaac
atcaactcagatcgcatccaggagaaggtggactctattgatgacaggcacaggaagaat
agagaggcagccagtgaacttctgatgagattgaaggataaccgagatctacagaaattc
ctgcaagactgtcaggagctgtccctctggatcaatgaaaagatgctcacagcccaggac
atgtcttatgatgaagccaggaaccttcacagcaaatggctaaagcatcaggcgtttatg
gcagaacttgcatccaacaaagaatggctggacaagattgagaaggaaggaatgcagctc
atttcagaaaagccagaaacagaagctgtggtgaaggagaaactcactggtttacataaa
atgtgggaagtccttgaatccaccacccagaccaaggcccagcggctctttgatgcaaat
aaggctgagctgttcacacagagctgtgcagatctagacaagtggctccatggcctggag
agccagattcagtctgacgactatggcaaagaccttactagcgtcaatattcttctgaaa
aagcaacagatgctagagaatcagatggaagtgcggaagaaggagatcgaggaactccag
agccaagcccaggcactgagtcaggaggggaagagtaccgatgaggtggacagcaagcgc
ctcactgtgcagaccaagttcatggaacttctggagcccttgaatgagaggaagcataat
ctgttagcttccaaggagatccatcagttcaacagggatgtggaggacgaaattctgtgg
gttggcgagaggatgcctttggcaacttccacagatcatggccataaccttcaaactgtg
caactgttaataaagaaaaatcagaccctccagaaagaaatccagggacaccagcctcgt
attgatgacatctttgagaggagtcaaaacatcatcacagatagcagcagcctcaatgcc
gaagcgatcaggcagaggctggccgacctgaagcagctgtgggggcttcttattgaggag
actgagaagcgccacaggcggctggaggaggcccacagggcccagcaatactactttgat
gcagctgaagcagaagcctggatgagtgagcaggaactgtatatgatgtctgaggaaaaa
gccaaggatgagcaaagtgctgtctccatgttgaaaaagcatcagattttggaacaggct
gttgaggactatgcagagacagtacaccagctctccaaaactagccgagccctggtagct
gacagccatcctgaaagtgagcgtattagcatgcggcagtcaaaagtggataagctatac
gctggcctgaaggatcttgctgaagaaaggagaggaaaacttgacgagaggcacaggctg
ttccagctcaacagggaggttgacgacctggagcagtggattgctgagagggaagtggtc
gcagggtcccatgagttgggacaggactatgagcatgtcacgatgttacaagaacggttc
cgagaatttgctcgagacacaggaaacattgggcaggagcgtgtggatacagtcaatcat
atggcagatgacctcatcaactctggacattcagatgctgccaccattgctgagtggaaa
gatggtctcaatgaagcctgggctgacctcctggagctcattgacacgagaacacagatt
cttgctgcctcctatgaactgcataagttttaccatgatgccaaggagatctttggccgc
atccaggacaaacacaagaaactccctgaggagcttggaagagatcagaacacagtggag
accttacagagaatgcacaccacctttgagcatgacatccaggctctgggcactcaggtg
aggcagctgcaagaggatgcagcccgcctccaggcagcctacgcgggggacaaggccgat
gacatccagaagcgtgagaatgaggttctggaagcctggaagtccctgctggatgcttgt
gagggtcgcagggtgcggctagtggacacgggagacaagttccgcttcttcagcatggtg
cgtgacctcatgctctggatggaagatgtcatccggcagattgaggcccaggagaaacca
cgggatgtgtcatctgttgaactgttaatgaataatcatcaaggtatcaaagctgaaatt
gatgctcgcaatgacagttttacaacttgcattgaacttgggaaatccctgctggcaagg
aaacactatgcttctgaggagatcaaggaaaagttactgcagttgacggaaaaaagaaaa
gaaatgattgacaagtgggaagaccgatgggaatggttaagactgattttggaggtccat
cagttctcaagggatgccagtgtggctgaggcttggctgcttgggcaggagccatacctg
tccagccgcgaaattggccagagtgtggatgaagtggagaagctcatcaagcgccacgag
gcatttgaaaagtctgcagcaacctgggatgagagattctctgccctggaaagattgaca
acattggagctactggaagtgcgaagacagcaagaggaagaagaaagaaagaggcggccg
ccttctccagagccaagcacgaaggtctcagaggagactgagtcccagcaatgggatact
tcaaaaggagaccaagtttcccagaatggtttgccggctgaacagggatctccacggatg
gcagaaaccacggacacaaatgaaatggtcaacggtgctgcagagcagagaacaagctcc
aaagagtccagtcccattccctctcccacctctgaccgcaaggccaaatctgcacttcca
gcccagagtgctgccaccctgccagccaggacacaagagacaccggcggcccagatggaa
ggcttcctcaatcggaagcacgagtgggaggcccacaataagaaagcctcgagcaggtcc
tggcacaatgtctattgtgtcataaataaccaagaaatgggcttctataaagatgccaag
agtgctgcttctggcatcccctaccacagtgaggtccctgtgactttgaaagaggctgtc
tgtgaagtggcccttgattacaagaagaagaagcatgtgttcaagctaagactaaatgat
ggcaatgagtacctcttccaagccaaagatgacgaggaaatgaacacatggatccaggcc
atctcctccgccatctcctctgacaaacatgacatgtccgccagcacccagagtacgcca
gcatccagccgggcgcagaccttgcccaccagcgtcgtcaccatcaccagcgagtctagt
cccggcaagagggagaaggacaaagagaaagacaaagagaagcggttcagcctttttggc
aaaaagaagtga
DBGET
integrated database retrieval system
