Peromyscus maniculatus bairdii (prairie deer mouse): 102928057
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Entry
102928057 CDS
T11302
Symbol
Trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
102928057 (Trim71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmav03019
]
102928057 (Trim71)
04121 Ubiquitin system [BR:
pmav04121
]
102928057 (Trim71)
Enzymes [BR:
pmav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102928057 (Trim71)
Messenger RNA biogenesis [BR:
pmav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102928057 (Trim71)
Ubiquitin system [BR:
pmav04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102928057 (Trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-C3HC4
zf-RING_5
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
102928057
NCBI-ProteinID:
XP_042138066
Ensembl:
ENSPEMG00000012573
UniProt:
A0A8C8TK00
LinkDB
All DBs
Position
7:complement(111861700..111913239)
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AA seq
855 aa
AA seq
DB search
MASFPETDFQICLLCKEMCGSPAPLSSSSSASSSSSQTSTSSAGGGGPGAAARRLHVLPC
LHAFCRPCLEAHRLPAPGGAGPTEALKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNLLD
AVVATADEPPPKNGRAGGGPGGAGGHSNHRHHAHHPPQRAAAPAPQPPPGPAASPAALLL
RRQHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIERGPPGPAAASAAQQ
LGLGPPFAGAPFSILSMYPDRLGFCQHHDEEVLHLYCDTCSVPICRECTLGRHGGHSFAY
LQDALQDSRALTIQLLADAQQGRQAIQLSIEQAQTVAEQVEMKAKVVQSEVKAVTARHKK
ALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLDSTVSAVQQVLEEGRALDILLA
RDRMLAQVQELKAIRSLLQPQEDDRVMFTPPDQALYLALKSFGFVSSGAFAPLTKATGDG
IKRALQGKVASFTVMGYDHDGEPRLSGGDLMSAVVLGPDGNLFGAEVSDQQNGTYVVSYR
PQLEGEHLVSVTLCNQHIENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSEGKLCRPWGVS
VDKEGYIIVADRSNNRIQVFKPCGSFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKD
NHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRIQLFGPDGVF
LNKYGFEGSLWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGSNNGQ
FLRPQGVAVDQEGRIIVADSRNHRVQMFEANGSFLCKFGAQGSGFGQMDRPSGIAVTPDG
LIVVVDFGNNRILIF
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttccccgagaccgacttccagatctgcctgctgtgcaaggagatgtgcggc
tcgcccgcgccgctctcctccagctcgtccgcctcgtcgtcgtcctcgcagacgtccacg
tcttccgcgggcggcggcggccccggggcggcggcgcggcgtctgcacgtcctgccctgc
ctgcacgctttctgccggccgtgcctcgaggcgcaccggctgcccgctccgggtggcgcc
ggccccaccgaggcgctgaagctccgctgtcccgtgtgcgaccagaaagtggtcctggcc
gaggcggcgggcatggacgcgctgccgtcgtccgctttcctgctcagcaacctgctggac
gccgtggtggcgaccgccgacgagccgccgcccaagaacgggcgcgcgggcggcggcccc
gggggcgcgggcggccacagcaaccaccggcaccatgcgcaccacccgccccagcgcgcc
gccgctccagcgccgcagccgccgcccggcccggccgcctctcccgcggcgctcctgctg
cgccgacagcacggctgcagctcgtgcgacgagggcaatgccgcctcgtcgcgctgcctc
gactgccaggaacacctgtgcgacaactgtgtccgcgcgcaccagcgcgtgcgcctcact
aaggaccattacatcgagcgcggccctcccgggccggcggccgcctcggcggcgcagcag
ctggggctcgggccgcccttcgctggcgcgcccttctccatcctttcgatgtacccagat
cgtctcggcttctgccagcaccacgacgaagaggtcctgcatctctactgcgacacctgc
tctgttcccatctgcagagagtgcacgctgggccgtcatgggggccacagcttcgcctac
ctccaggacgccctccaggactctcgggcactcaccatccagctgctggctgatgcccag
caaggccgccaagccatccagctgagcatcgagcaggcccagaccgtggcagaacaggtg
gagatgaaggcgaaggtggtccagtcggaggtcaaggctgtgacagcccgccataagaaa
gccctggaggagcgcgagtgcgagctgttgtggaaggtggagaagataaggcaggtgaag
gctaaatctctgtacctgcaggtggagaagcttcgtcaaaacctcaacaagctagacagc
accgtcagtgccgtccagcaggtcctggaggagggccgggccctggacatcctgctggcc
cgagaccggatgctggcccaagtgcaagagctcaaggccatccggagcctcctgcagccg
caggaagatgaccgagttatgttcacgccccctgaccaggccttgtacctggccctcaag
tctttcggctttgtcagcagcggagcgtttgccccgctcacaaaggccacaggagatggc
attaagcgagcccttcagggcaaagtggcctccttcaccgtgatgggctatgatcatgat
ggtgagcctcgcctctctggaggcgacctgatgtcagctgtggtcctgggccccgatggc
aacctgtttggtgcagaagtgagtgatcagcagaatgggacttacgtggtgagctacagg
ccccagcttgagggtgagcacctggtgtcggtgacactgtgcaaccagcacatcgagaac
agccccttcaaggtagtggtcaaatcaggccgcagctacgtgggcatcgggctccccggg
ctgagcttcggcagcgaaggggacagtgaaggcaagctctgcaggccctggggcgtgagt
gtggataaggagggctacatcatcgtggctgaccgcagcaataaccgcatccaggtgttc
aagccctgtggctccttccaccacaaatttggtaccctaggttcccggcctgggcagttt
gaccgaccagctggggtggcctgcgatgcctcccgcaggatcgtagtggccgacaaagac
aatcatcgcattcagatcttcacctttgagggccagttcctcctcaagtttggtgagaaa
ggaaccaagaatgggcagtttaactacccttgggatgtagcagtgaattctgagggcaag
atcctggtttcagacacccgaaaccaccgcatacagctgttcgggcctgatggggtcttc
ctgaataagtatggctttgaggggtctctctggaagcattttgactctccacggggtgtg
gcttttaaccacgagggtcacctggtagtcaccgatttcaacaaccaccggcttctggtc
attcaccctgattgtcagtcagcacgcttcttgggctcagagggcagcaacaatggacag
tttctccgaccgcagggtgtagccgtggaccaagaagggcgaatcattgtggccgattcc
agaaatcaccgggtgcagatgtttgaggccaacggcagcttcctgtgcaagtttggtgct
cagggcagtggttttgggcagatggaccgcccctcaggtattgcggtcaccccagatgga
ttgatcgtcgtggtggacttcggcaacaatcgaatcctcatcttctaa
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