Peromyscus maniculatus bairdii (prairie deer mouse): 102928072
Help
Entry
102928072 CDS
T11302
Symbol
Atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102928072 (Atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmav03000
]
102928072 (Atrx)
03036 Chromosome and associated proteins [BR:
pmav03036
]
102928072 (Atrx)
Transcription factors [BR:
pmav03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
102928072 (Atrx)
Chromosome and associated proteins [BR:
pmav03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
102928072 (Atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
102928072
NCBI-ProteinID:
XP_006992662
LinkDB
All DBs
Position
X:79874464..80055129
Genome browser
AA seq
2476 aa
AA seq
DB search
MTAEPMSESKLNTLVQKLHDFLAHSSEESEETCSSPRLVMNQSTDKNSGSIINSDMMDNN
KEEGTSTSEKSRSSGSSRSKRKPSIVTKYVESDDEKPVDENVNEKAANENSENITMQSLP
KGTVIVQPEPVLNEDKDDFKGPEFRSRSKMKTENLKKRGEDGLHGIVSCTACGQQVNHFQ
KDSIYRHPSLKVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKK
CILRNLGRKELSTILDENNQWYCYICHPEPLLDLVTACNSVFENLEQLLQQNKKKIKVDS
EKSSKVCDQTSKLSPKKNSSSCNGEDKKVDVSCSASVTCTYSALTVPKDMIKKTKKLIET
TSNMNSSYIKFLKQAADNSEMSSAVKLRQLKAFKSVLADIKKAHLSLEEDLNSEIQALDA
VHKEKNTKELKITDAKADTKVRKGEKSCTAEKKDFLKLDARSSIKVTDSEHTPGEEHKAN
KSASGEQKGSGRKDGPQYEPTNTSEDLDMDIVSVPSSVPEDIFDSLENAMEVQCSADYQG
DGNSGTEPELESTSLKLNTSSKDSRGSMKSKTAVRVRKELYVKLTPVSLSNSPMKGADCQ
EVSQEKDGRKSSGVTPNSEKCGLEEENSDNEHSVENDVALLLEESDLRRSPRVKTTPLRR
QTESNRAISNSDEESNETIKEKQKLSVPGRKKDKRNFSDGAAENPKAHKFPKAKQPGIVD
QTSDSDEMLAVLKEISQMSHSSSSDTDINEIQMNHKVETGKDDNGKRKRKNSTSGSDFDI
KKGKSAETSIISKKKRQNYSESSNYDSEVEREIKTMSKIGAARVAKKSVSDKKERDFSED
EKQSKKIVDNEGQERVRTAKESLSGATGDAEGKQGDSLSAVEGSGEKGKGAVGSREALCT
RQQPSVFSDSVEKPSGGEEDVNLDDKRVSKPKIKTKYLRARPCRKVRRASLDITDRFPKK
EQSEESSEGEKKQSRQETGARGKKTTDLKEETIKQQYESSSDGTEKLPEGEEMGPFPQGL
KQIKNDSTDAEKKGRKLKEKSSKKKEDASDGVDKLPGKGDSCDSSEDKKNRNRVSRREKK
KSSLPAKRSGKRPECSSSDTEKYSLKGECCDSTDKRPKRTELRERRNLNSKRNTKEIQSG
SSSSDAEGSSEDTKKRKKQRTSAKKKTGNAKAKRRNSLRTSTKRKQADITSSSSDIGDDD
QNSAGEESSDEQKIKPVTENLVLPSHTGFCQSSGDEALPKSAPATVDDDDDDNDPENRIA
KKMLLEEIKANLSSDEDGSSDDEPEGERKRIGKQGEETPGDEAPNQVNSESDSDSEESKK
PRYRHRLLRYKLTESDGESGEEKKTKSKEHKEAKGRNRRKVSSEDSEDTDFQESGVSEEV
SESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSHSEEEKKEDDDED
EEDEEEEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERRKRIAEREREREKL
REVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCE
SVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNE
FEKWQEGLNDDEKLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKS
RKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIE
YHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQR
KDYTALTKFLPPKHEYVLAVRMTAIQCKLYQYYLDHLTGVGNSTEGGRGKAGAKLFQDFQ
MLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIASDSDETSMSLSSDEYAKKKKTKGKK
GKKDSSSSGSGSDNDVEVIKVWNSRSRGGGEGNVDETGNTPSGSMKLEESKTTSTSNPSS
PAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLEL
ASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIIS
TKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIY
DRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKKKRDTPMLPKDTI
LAELLQIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKGLTMRFNIPTGTN
LPPVTFSSQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEATNSVTAVRIQPLEDIIST
VWKENMNLSEAQVQALALSRQASQELDVKRREAIYNDVLTKQQMLISCVQRILMNRRLQQ
QYNQQQQQQMTYQQATLSHLMMPKPPNLIMTPSNYQQIDMRGMYQSVAGGMQPPPLQRAP
PPMRSKNPGPSPGKSM
NT seq
7431 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgagcccatgagtgaaagcaagttgaatacattggtgcagaagcttcatgac
ttcctagcacattcatcagaagaatctgaggaaacgtgttcttccccacgacttgtaatg
aaccaaagcacagataaaaacagtggttctataattaactctgatatgatggataataac
aaggaagagggaactagcacctcagaaaaatccaggtcttcaggatcttcacggtcaaag
aggaaaccttcaattgtgacaaaatacgtagagtctgatgatgaaaaacccgtggatgag
aatgtaaatgaaaaagctgctaatgagaattcagaaaatattactatgcaaagcttgcca
aaaggtacagtgattgtacaaccagagccagtgctgaatgaagacaaagatgattttaaa
gggcctgaatttagaagcagaagtaaaatgaaaactgaaaatctcaaaaaacgcggagaa
gatggacttcatgggatcgtgagctgcacagcttgtggacaacaggtcaaccattttcaa
aaagattccatttatagacacccttcactgaaagtccttatttgtaagaactgctttaag
tattatatgagtgacgatattagccgtgactcagatggaatggatgaacaatgtagatgg
tgtgcagaaggtgggaacttgatttgttgcgacttctgccataatgccttctgtaagaaa
tgcatcctgcgcaaccttggtcgaaaggagttgtctacaatacttgatgaaaacaatcaa
tggtattgctacatttgtcatcccgagcctctattggacttggttactgcatgtaacagc
gtgtttgagaatttggaacagttgttgcaacaaaacaagaagaagatcaaggtcgacagt
gaaaagagcagtaaagtatgtgaccaaacatccaagttgtctccaaagaagaatagttcc
agttgtaatggagaagacaagaaagtcgatgtttcgtgttctgcttctgtaacctgcact
tactcagcactaactgtgcccaaagacatgattaagaagacaaaaaaactgattgagact
acatccaacatgaactccagttacattaagtttctgaagcaggcagcggataattcagaa
atgagttctgctgtgaagttacgtcagcttaaggcttttaaatctgtgttggctgatatc
aagaaggctcatctttcactggaagaagatttgaattcagagatccaagctttggatgct
gtacacaaagagaaaaataccaaagagcttaaaatcacagatgcaaaggccgacacaaaa
gtacggaagggggagaaatcctgtactgcagaaaagaaagattttttaaagttagatgct
agatcatcaataaaggtgacagacagtgagcacaccccaggagaagagcacaaagcaaat
aaaagtgctagtggtgaacagaagggttcgggtaggaaagatggacctcagtatgaacct
actaacacttctgaagacttagacatggatattgtgtctgttccttcctcagttcctgaa
gacatttttgacagccttgagaatgctatggaagttcagtgttcagctgattatcaagga
gatggtaacagtgggaccgagccagaactggagagcacatctctgaaacttaacacttct
tcaaaagacagcagaggaagtatgaagtcgaaaacggcagtcagagtaagaaaagagttg
tatgttaaactcacccctgtttccctttctaattccccaatgaaaggtgctgactgccag
gaagtttcacaagagaaggatggccgtaaaagttctggggtgacccccaactcagagaaa
tgtggactggaagaggaaaatagtgataatgaacattcagtggaaaatgacgttgcatta
cttctagaagaatctgatctccgaaggtccccacgtgtaaaaactacaccattgaggaga
caaacagaatctaatcgtgcaatatcaaattcagatgaagaaagcaatgaaactattaaa
gaaaaacaaaagctgtcagttcctggaagaaaaaaggataagcgaaatttttctgacggt
gctgccgagaaccctaaagctcataagtttcccaaagctaagcaaccggggattgtggat
cagacttcagattccgatgaaatgctagcagtccttaaagagataagccagatgagtcac
agttcttcttcagacactgacattaatgaaatacagatgaatcataaagttgaaacaggg
aaagacgataatggaaaaaggaaacggaaaaactctacttctgggtcagattttgacatt
aaaaaaggaaagtcagctgaaacctctattatctctaaaaagaaacgccaaaactactca
gagtcctctaactatgactcagaggtagagagagagataaaaaccatgagcaaaattggg
gctgccagagtagctaaaaaaagtgtttcagataaaaaagaacgtgacttttctgaagat
gagaaacagagcaaaaaaattgtggataatgaagggcaggaaagagtgaggactgcaaaa
gagagcttgtctggtgccactggggatgctgaaggcaaacagggagatagtttgtctgca
gtggaaggttcaggtgagaaaggcaagggtgcagtgggatccagagaggcgctttgtacg
aggcagcagccaagtgttttctccgatagtgtggaaaagccttcaggaggagaggaggat
gtaaatttggatgacaaaagagtctctaaacctaaaataaagactaaatatctgagagcc
agaccatgtagaaaagtacggcgtgcttcattggatattactgatagatttccaaagaaa
gaacagagcgaggaatcttccgaaggtgagaagaagcagagcagacaggaaaccggagcg
agaggaaagaaaactacagacttaaaggaagaaacaattaagcaacagtatgagtcttcc
tctgatgggactgagaaattgcctgagggagaagaaatgggtccttttcctcaaggccta
aagcaaatcaagaatgacagcactgatgcagagaagaagggcagaaaactgaaagagaag
tcatcgaaaaagaaggaagacgcatctgatggcgtggataagttgccagggaaaggagat
agttgtgactcttcagaagataaaaagaacaggaatagagtgtctcggagagagaagaag
aaatccagcttgcctgcaaagagatccgggaagaggccagagtgttcatcatcagatact
gagaaatattccttgaaaggagagtgttgtgactctactgataagagaccgaaaagaact
gaattgagagaaagaagaaatttaaattcaaagagaaataccaaggaaatacagagtggt
tcctcttcttctgatgctgagggaagttcagaagatactaaaaagcggaagaaacaaaga
acttcagcgaaaaagaagacaggcaatgccaaggcaaaaagaagaaactccttaagaacg
agtactaaaaggaagcaagcagacattacctcttcatcttctgatataggagatgacgat
cagaattctgcaggcgaggagagcagtgatgaacagaaaataaagcctgtgactgaaaat
ctagtgctgccttcacacactggattttgtcaatcttcaggagacgaagccttacctaaa
tcagcgcctgccaccgtggatgatgatgacgacgacaatgaccctgagaatagaattgcc
aagaagatgcttttagaagaaattaaagccaacctttcctctgatgaggatgggtcttca
gatgatgaaccagaaggagagagaaaaagaattggaaaacaaggtgaagaaaccccagga
gatgaggccccaaatcaagtcaattctgagtcagattcagattctgaagaatcgaagaag
ccaagatacagacatagacttttgaggtacaaactgactgagagtgatggagaatctgga
gaagaaaaaaagacaaagtctaaagaacacaaagaagccaaaggaagaaatagaaggaag
gtgagcagtgaggattcagaagacactgacttccaagagtcaggagttagtgaagaagtc
agtgaatctgaggatgaacaacggcctagaacaaggtctgcaaagaaagcagaattggaa
gaaaatcagcggagttataagcagaaaaagaaaagacgacggattaaggttcaagaggat
tcatccagtgaaaataagagccattctgaagaagaaaagaaggaagatgatgatgaggat
gaggaggatgaagaggaagaggatgaaaatgatgattctaagtcacctggaaaaggcaga
aagaaaattcggaagattcttaaagatgataaactaagaacagaaacccagaatgctctt
aaagaagaggaagagagacgaaaacgtattgcagagagggaacgtgagagagagaaatta
agagaggtgatagaaattgaggatgcttcacctaccaagtgtccaataacaaccaaattg
gttttagatgaagatgaagaaaccaaagaacctttagtgcaggttcatagaaacatggtt
ataaaattgaaaccccaccaagtagatggtgttcagtttatgtgggattgctgttgtgag
tctgtgaaaaagacaaagaaatctccaggttcagggtgtattcttgcccactgcatgggc
cttggtaaaaccttgcaggtggtcagttttcttcacacagttctcttgtgtgacaaactg
gatttcagtacggcattagtggtttgtcctcttaacactgctttgaattggatgaatgaa
tttgagaagtggcaggagggcttaaatgatgatgaaaagcttgaggtctctgaattagca
actgtgaaacgtcctcaggagagaagttatatgttacagagatggcaagaagatggtggt
gttatgatcataggctatgaaatgtacagaaatcttgctcaaggaaggaatgtgaagagt
cggaaacttaaagaaatatttaataaagctttagttgacccaggtcctgattttgttgtt
tgtgatgaaggccatattttaaaaaatgaagcatctgctgtttccaaagctatgaactct
atacgatcgagaaggaggattattttaacaggaacgccacttcagaataacctaattgag
tatcattgcatggttaactttatcaaggaaaatttgcttggatccatcaaggagttcagg
aatagatttataaatcctatccaaaatggtcagtgtgcagattctaccatggtggatgtg
agagtgatgaaaaaacgtgctcatattctctatgagatgttagccggatgtgttcagagg
aaagattatacagcattaacaaagttcttacctccaaaacatgaatatgtattagctgtg
agaatgactgctattcaatgcaagctctatcagtactacttagatcacttaacaggtgta
ggcaatagcactgaaggaggaagaggaaaggcaggtgcaaagctctttcaggattttcag
atgctaagtagaatctggactcatccttggtgtttgcagctggattacattagcaaagaa
aataagggttattttgatgaagatagtatggatgaatttatagcttcagattctgatgaa
acctccatgagcttaagctcagatgagtatgcaaagaagaagaaaacaaagggtaaaaaa
gggaaaaaggatagtagctcaagtggaagtggtagtgacaatgatgtggaagtcatcaaa
gtctggaattcaagatctagaggaggtggagaaggaaatgtggatgaaacaggaaacacc
ccttcaggttctatgaagctagaagaaagtaaaactacttccacttctaacccaagtagc
ccagctccagattggtacaaagattttgttacagatgctgatgctgaggttttagagcat
tctgggaaaatggtacttctttttgaaattcttcgaatggcagaagaaattggggataaa
gttcttgtttttagccagtcactcatatctctggacttgattgaagattttcttgaattg
gctagtagggagaaaacagaagacaaagataaacctctcatttataaaggtgaagggaag
tggctccgaaatattgactattaccgtttggatggttctacgactgcacagtcaaggaag
aagtgggctgaagaatttaatgacgaaaccaatgtgagagggcggttgtttatcatttcc
accaaagcaggatctcttggaattaacctggtagctgctaatagagtaattatatttgat
gcttcctggaatccatcttatgacatccagagtatattcagagtttatcgctttggacaa
actaagcctgtttatgtatataggttcttagctcagggaaccatggaagataagatttat
gatcgacaggtaacaaagcagtcactatctttccgagttgttgatcaacagcaggttgaa
cgtcattttaccatgaatgagcttactgaactttatacttttgagccagacttactagat
gatcctaattcagaaaagaagaagaaaagggatactcccatgctgccaaaggataccata
cttgcagaacttcttcagatacataaagaacacattgtaggatatcatgagcatgactcg
cttttggaccacaaagaagaagaagagctgactgaagaagaaagaaaagcagcttgggcc
gaatatgaagcagaaaagaagggactgaccatgcgtttcaacataccgactgggaccaat
ttaccccctgtcactttcagctctcaaactccttatattccttttaatttgggagccctg
tcagcaatgagtaatcaacagctggaggaccttattaatcaaggaagagaaaaagttgta
gaagcaacgaacagtgtgacagcagtgaggattcagcctcttgaagatatcatttcaact
gtatggaaagagaacatgaatctctccgaggcccaagtacaagcactagcattaagtaga
caagccagccaggagcttgatgtgaaacgcagagaagccatctacaatgatgtattgaca
aaacagcagatgttaatcagctgtgttcagcgaatactcatgaacagaaggctccagcag
cagtacaatcagcagcaacagcaacaaatgacttatcagcaagcaacactgagtcacctc
atgatgccaaagcctccaaatttaatcatgactccttccaactaccagcagattgatatg
agaggaatgtatcagtcagtggctggtggtatgcagccaccacccttacagcgcgcaccg
cccccaatgagaagcaaaaatccaggaccttccccagggaaatcaatgtga
DBGET
integrated database retrieval system
