Peromyscus maniculatus bairdii (prairie deer mouse): 102928471
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Entry
102928471 CDS
T11302
Symbol
Depdc5
Name
(RefSeq) GATOR1 complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Pathway
pmav04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
102928471 (Depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmav04131
]
102928471 (Depdc5)
Membrane trafficking [BR:
pmav04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
102928471 (Depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
102928471
NCBI-ProteinID:
XP_076401868
Ensembl:
ENSPEMG00000017938
LinkDB
All DBs
Position
10:complement(6068740..6206269)
Genome browser
AA seq
1636 aa
AA seq
DB search
MKWKQDGPLRVGTHRGRQDDFPAPRLEQLKKPQDKMRTTKVYKLVIHKKGFGGSDDELVV
NPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKEDLQKETISVDQTVTQVFRLRPYQDV
YVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKSLVSTCAYITQKVEFAGIRAQAGELW
VKNEKVMCGYISEETRVVFRSTSAMVYIFIQMSCEMWDFDIYGDLYFEKAVNGFLADLFT
KWKEKNCSHEVTVVLFSRTFYDAKSIDEFPEINRASIQQDHKGRFYEDFYKVVAQNERRE
EWTSLLVTIKKLFIQYPVLVRLEQAGGFPQGDNSTSAQGNYLEAINLSFNVFDKHYINRN
FDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDNGIGVDLVCMGEQPLHAVPLFKLHNR
SVPRDSRLGDDYNIPHWINHSFYTSKSQLFCNSFTPRIKLAGKKPASEKTKNGRDTSLGT
PKESENTLPIQVDYDAYDAQVFRLPGPSRAQRLATCRSVREQENHNRKSASSCDVSSSPS
LPSRALPTEEVRSQASDDSSLGKSTNILMIPHPHLHQYEVSSSLGYTSTRADVLENMIEP
PQRDSSAPGRFHVGSAESMLHVRPGGYTPQRALINPFAPSRMPMKLTSNRRRWMHTFPVG
PSGEAIQIHHQTRQNMAELQGNRQRDPTHSSAELLELAYHEAAGRHSTSRQPGDSMSLNF
SGTEELSVSLLSNSGAGMNPRTQNKDSPEDGVSTSPDPILTLSAPPVVPGFCCTVGVDWK
SLTTPACLPLTTDYFPDRQGLQNDYTEGCYDLLPEADMDRRDEEGVQMTAQQVFEEFICQ
RLMQGYQIIVQPKAQKPNTTVPPPLSSSPLYSRGLVSRNRPEEEGQYWLSMGRTFHKVTL
KDKMITVTRYLPKYPYESAQIRYTYSLCPSHSDSEFVSCWVEFCHERLEEYKWNYLDQYI
CSAGSEDFSLIESLKFWRTRFLLLPACVTATKRITEGEVHCDIYGDRPRADEDEWQLLDG
FIRFVEGLNRIRRRHRSDRMIRKGTAMKGLQMTGPIAAHSLESTGPPVGKKGTSALSALL
EMEASQKCLGEQQAAVHGKSSSQAAENSSVAMTPTYVDSPRKDGAFFMDFVRSPRTASSA
FYPQASMDQTAALVLDGASLGMSTCQSMDRGSNQTFGNSQNVGEQAFPTANSDCSSQQHV
ASSLTSSSTLVEILEAMKHPSTGVQLLSEQKGLSPCCFISAEVVHWLMNNVEGVQTQAMA
IDIMQKMLEEQLITHASGEAWRTFIYGFYFYKIVMDKEPDRVPMQQPSAPWHTAGVDDFA
SFQRKWFEVAFVAEELVHSEIPAFLLPWLPSRPASYASRHSSFSRSFGGRSQAAALLAAT
VPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSLNAAFEIKLHWMAVTATVLFEMVQGWHR
KATSCGFLLVPVLEGPFALPSYLYGDPLRAQLFIPLNLSCLLKDGSEHLFDSFEPETYWD
RMHLFQEAIAHRFGFVQDKYSASAFNFPAENKPQYIHVTGTVFLQLPYSKRKFSGQQRRR
RNSTSSTNQNMFCEERVGYNWAYNTMLTKTWRSSATGDEKFADRLLKDFTDFCINRDNRL
VVFWTNCLEKMHASAP
NT seq
4911 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggaagcaggacggtccgctgagagttggtacacatagaggaaggcaagatgac
ttccctgctccaagattggaacagctgaagaaaccacaagacaaaatgagaactacaaag
gtctacaaacttgtcatccacaagaagggctttgggggcagtgatgatgagctagtcgtg
aaccctaaagtgtttcctcacatcaaacttggagacattgtggagattgctcaccccaat
gatgaatacagtcctctgcttttgcaagtcaagtctcttaaggaagatttacagaaagaa
actatcagtgtggaccagactgtgactcaagtattccggctaagaccttatcaagatgtc
tatgtgaatgttgtagaccccaaggatgtgactcttgaccttgtggaattgacttttaag
gatcagtacattggccgtggggatatgtggcgactaaagaaaagtttggtaagcacttgt
gcctatatcactcagaaagtggaatttgctggcatcagggcgcaagctggtgagctgtgg
gtcaagaatgagaaggtcatgtgtggttatatcagtgaagagaccagggtggtgttccgt
tctacgtcggctatggtttacatatttattcagatgagctgtgaaatgtgggattttgat
atttatggggatctgtactttgagaaagctgtgaatggtttccttgctgatctgtttact
aagtggaaggagaagaactgtagtcatgaagtgactgtggtcctattttccagaactttt
tatgatgcaaaatctattgatgaatttcctgaaataaaccgagcttcaattcaacaggat
cacaaagggagattctatgaggacttttacaaagtggtggctcagaacgagagaagggaa
gagtggacatcgctccttgtgaccattaaaaaactcttcattcagtatccagtgttggtg
cgactggaacaggcagggggctttcctcaaggagacaattctacctcagcacaaggaaac
tacctagaggccatcaacttgtctttcaatgtgtttgacaagcactacatcaaccgaaac
tttgaccgaactgggcagatgtctgtggtgatcacgcctggggtgggtgtctttgaagtg
gatcgtctactcatgatcttgaccaagcagcgtatgattgataacggaattggtgtggac
ttagtgtgcatgggagagcagcctttacatgctgtgccattattcaagctgcacaaccgg
agtgttccgagggattctcggctgggcgatgattataatattcctcactggataaaccac
agtttctacacgtccaaaagccagctcttttgtaacagtttcactccacggataaagctg
gcaggaaagaagcctgcttctgagaaaacaaaaaatggccgtgatacatctcttgggact
ccaaaggaatctgagaacacccttcccatccaagtagattatgatgcctacgatgctcaa
gtgttcaggctgcctggtccatcccgggctcagcgcctcgccacctgcaggtctgtgaga
gaacaggagaatcataatcgcaaaagtgccagctcctgtgatgtctcgtccagcccttcc
ctaccaagccgcgcactgcccactgaggaagtgaggagccaagcttctgatgatagctcc
ctgggcaagagcaccaacatcctgatgatccctcacccccacctgcaccagtatgaagtc
agcagctcgctgggctacaccagcacccgagcagatgtcctggagaacatgatagaacca
ccacagcgggactctagtgcgccagggaggttccatgtgggcagtgcagagtccatgctc
catgttcggcccggtggatacacacctcagagagcactgattaacccctttgccccctca
agaatgcccatgaagctcacatccaacagaaggcgctggatgcacacttttcctgtagga
ccatccggagaggccatccagatccatcatcaaacccggcagaacatggcagagctgcag
ggcaacaggcagagggaccccacccactcctctgcagagctgttggagttggcatatcat
gaagctgccggaaggcacagcacttcccgccagcctggtgacagcatgtccttgaacttc
agtggaacggaagagctttctgtcagcctgcttagcaacagtggtgcaggtatgaatcct
aggacccagaataaggattctccagaggatggtgtttctacctctccagacccaattctg
acactgtctgctccccctgtagtgccaggcttctgttgcacagttggagtggactggaag
tctcttactactcctgcatgccttcctctcaccactgactacttcccggaccgtcagggc
ctgcagaatgactacacagagggctgctatgatctcctcccagaagcagacatggacagg
agggatgaggagggggttcaaatgacagcccagcaagtttttgaggagttcatttgccag
cgtctcatgcagggctaccagatcatagtacagccaaaggcccagaaacccaacaccaca
gttccacccccgctgagcagcagtccactctatagcagaggccttgtgtccagaaaccgc
cctgaggaggaaggccagtattggctgagtatgggcagaaccttccataaggtgacactc
aaggacaagatgatcacagtaacacgataccttcccaagtacccttatgaatctgcccag
atccgttatacctacagcctctgcccttcccactcggactcagagtttgtctcctgttgg
gtggaattctgccatgaacggctagaggagtacaagtggaattacctagatcagtatatt
tgttctgctggctctgaagatttcagtttaattgagtctctgaagttctggagaacccgg
ttcctactactgccagcctgtgtcactgccaccaagcgcatcacagaaggggaggtgcac
tgtgacatctatggggacagaccccgagcagatgaagatgagtggcagctcttagatggc
tttattcgctttgtagagggcttaaaccgcatccgcaggcgccatcgctcagaccgcatg
attcggaaagggactgccatgaaaggcttgcagatgactgggcccatcgctgcacactcc
ctcgagtcaacaggccccccagttgggaagaaaggaacctcagctctgtctgcactgctg
gagatggaggctagtcagaagtgcctaggagagcagcaggcagctgtgcatggaaaaagt
tcctctcaggcagctgagaacagcagtgtcgctatgacgcccacctatgtggacagccca
cgaaaggacggggccttctttatggattttgtccgcagcccacgcacagcatcatctgcc
ttctaccctcaggcatctatggaccaaacagctgctctggtgttggatggtgccagtttg
gggatgagcacatgccagtccatggatagaggtagcaaccagacctttgggaactcccag
aacgtaggagaacaggcctttcccactgcaaactctgactgcagctctcagcagcatgta
gcaagctctctgacatcatcctctaccctggtggagattctggaagccatgaagcatccc
tcgacaggagtccagctgctctctgaacagaagggcctgtcgccatgctgcttcatcagt
gctgaggtggtgcactggctgatgaacaatgtggagggggtccagacgcaggcaatggcc
atcgacatcatgcagaaaatgctggaagagcagctcataacgcatgcatctggtgaagcc
tggcggaccttcatctatggcttctatttctacaagatagtaatggacaaagagcccgat
cgagtgcctatgcagcagcccagtgccccctggcacacagcaggagtggatgactttgcc
agcttccagcgcaagtggtttgaggtggcctttgtggcagaagagcttgtgcactctgag
attccggccttcctcctgccctggctacccagccggccagcctcttacgcaagcaggcac
agctccttcagccgaagttttggaggacggagccaggcagctgcactgttagctgccact
gtcccagagcagaggactgtgaccctggatgttgatgtgaacaaccgaacggaccggctg
gagtggtgcagctgttactaccatggaaacttctctctcaatgcagcctttgagatcaag
ctacactggatggcggtgactgccacagtactctttgagatggtccaaggttggcatcga
aaagctacctcctgtggcttcttactcgtcccggttttggagggtccttttgcactgccc
agttacctgtatggcgaccctctgcgggcccagctcttcatcccactcaacctcagctgc
ctgctcaaggacggcagcgagcacctgttcgacagctttgaaccagaaacatactgggac
cgaatgcaccttttccaggaagccattgcacacaggtttggatttgtacaagataagtat
tctgcctctgcttttaacttccctgctgagaacaagccacagtatatccatgttacagga
acagtgtttcttcagctgccttactccaaacgcaagttttctgggcagcagcgccggcgg
cggaactccaccagctccaccaaccagaacatgttctgtgaggagcgagttggctacaac
tgggcctacaacaccatgctgaccaagacatggcgctccagtgctacaggggacgagaag
tttgctgaccggctgctgaaggacttcacagacttctgcatcaaccgtgacaaccgactg
gtcgtgttctggacaaactgcctggagaagatgcatgccagcgccccatga
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integrated database retrieval system
