Peromyscus maniculatus bairdii (prairie deer mouse): 102928748
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Entry
102928748 CDS
T11302
Symbol
Ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pmav03037
]
102928748 (Ift88)
Cilium and associated proteins [BR:
pmav03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
102928748 (Ift88)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_7
TPR_8
TPR_19
TPR_6
TPR_16
TPR_14
CFAP70_TPR_C
TPR_11
ANAPC3
RMD1-3
TPR_10
TPR_17
TPR_CcmH_CycH
ARM_TT21_4th
DUF6340
TPR_9
ARM_TT21_5th
CNOT10_TPR
TPR-S
TPR_YpiA_C
TPR_21
CFAP70_mid_TPR
RPN7
DUF6584
TPR_15
ARM_TT21_C
HAT_PRP39_C
RMD9_mid
Coatomer_E
ARM_TT21_2nd
TTC22_N
NBD_SMAX1
Motif
Other DBs
NCBI-GeneID:
102928748
NCBI-ProteinID:
XP_076401204
Ensembl:
ENSPEMG00000020287
LinkDB
All DBs
Position
9:55222627..55329385
Genome browser
AA seq
789 aa
AA seq
DB search
MMENVHLAPETDEDDLYSGFNDYNPAYDTEELENDTGFQQAVRTSHGRRPPVTAKIPSTA
VSRPIATGYGSKTSLTSSMGRPMTGTIQDGVARPMTAVRAAGFSKAALRGSAFDPLGQSR
GPAPPLEAKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVR
QREQVTTPENINLDLTYSVLFNLASQYSANEMYAEALNTYQVIVKNKMFSNAGRLKVNMG
NIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGITFIKTGQYSDAINSFEHIMS
MAPNLKAGFNLILSCFAIGDREKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNLLIEAI
KNDHLRQMERERKAMAEKYIMTAAKLIAPVIEASFAVGYNWCVEVVKASQYVELANDLEI
NKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVNS
DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALD
SFLKLHAILRNSAQVLCQIANVYELMEDPNQAIEWLMQLISVVPTDSQALSKLGELYDSE
GDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLM
VASCFRRSGNYQKALDTYKEIHRKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRLEKM
KEMREQRIKSGRESGGGGPRSKREGSSGSDASYVDPLGPQIERPKTAAKKRIDEDDFADE
ELGDDLLPE
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaatgtgcacctggcaccagaaacagatgaagatgatctttattctggtttt
aatgactacaacccagcctatgatactgaggagttggagaatgacacaggttttcagcaa
gcggtgagaaccagtcatggcagaagacctccagtaactgctaaaataccaagcacagca
gtcagcagacccatagccactggatacgggtctaagacatccctgacatcatcaatggga
agaccaatgacagggactatccaggatggagttgctcgacccatgacagcagtgagagca
gctggcttttccaaggcagctttacgaggctctgcgtttgaccccctcggccagtccagg
ggccctgctcctcctttggaagccaaaaacgaagatagtccagaggaaaagatcagacag
ttggagaagaaagtaaacgagctggtagaagagagctgtattgccaacagctgcggagac
ttaaagctggccttagaaaaggcaaaagatgcaggaaggaaagagagagtcctggtgaga
cagcgagagcaagttacaactccagaaaatatcaacctggacttaacatactccgttctc
ttcaacttggccagtcagtattcagctaatgaaatgtatgcagaagcactaaacacatac
caagttatagtgaaaaataagatgtttagcaatgcaggaagactgaaagtgaatatggga
aatatttatttaaagcagaggaattattccaaagccattaagttctaccgaatggcctta
gatcagatcccgagtgttcataaagaaatgaggattaaaataatgcagaacattggaatt
acatttataaaaactggtcaatattcagatgccattaactcattcgagcacatcatgagt
atggccccgaatctgaaggcaggcttcaacctcattctcagctgtttcgccattggagat
cgagagaaaatgaagaaggcattccagaaattaattgctgttccgttagaaattgatgaa
gatgataaatatatctccccaagtgatgatccccatactaacttactgattgaggctata
aaaaatgaccatctcaggcagatggaacgtgaaaggaaagccatggcagaaaaatatatc
atgacagctgcaaagctcatcgctcctgtgatcgaagcgtcctttgctgtgggttataac
tggtgtgtggaagtggtgaaggcttctcagtacgtggagctggccaacgacctggagatt
aacaaagcaattacatacttgagacaaaaggactttaaccaagctgtagacaccttgaag
atgtttgaaaagaaggacagtagagtgaaaagtgcagctgcaaccaacctctccttcctg
tattatctggaaaatgaatttgcccaggccagcagctatgcagacctagctgtgaactcg
gatagatacaacccatcagctctcactaataaagggaacacggtttttgcaaatggtgat
tatgagaaggcagctgaattctataaagaggccctaagaaatgattcttcttgtactgaa
gcactttataacattggcctcacctataagaagctaaaccgtctggatgaagccctggac
tccttcctgaaactgcatgcaatccttcggaacagcgctcaagttctttgccagatagca
aatgtatatgagctaatggaagatcccaatcaagccattgagtggctgatgcagttgatc
agcgtggtgccgactgactcccaagctctgtctaaactaggagaactatacgacagtgag
ggggataagtcccaggcgttccagtattactatgagtcatacaggtatttcccttctaat
attgaggtcattgagtggcttggagcttattacattgatacccagttctgtgaaaaagct
attcagtactttgaaagagcatctcttatacaacccacacaggtgaaatggcagctgatg
gtggctagctgtttcagaagaagtggtaactaccaaaaggcattagatacttacaaagag
atccacaggaaatttccagagaatgttgaatgtttgcgtttcttggttcgtctctgcaca
gatattggattaaaagaagttcaagaatatgccacaaaactcaagaggttggaaaaaatg
aaagaaatgagggaacagcgcatcaagtcgggcagagagagcggcggcggcggccctcgc
agcaaacgagaggggagctcgggcagtgatgcctcctatgtggatccactgggccctcaa
atagaaagaccaaaaactgcagccaaaaagagaatcgacgaggatgattttgctgatgaa
gagttaggagatgacttgcttccagaataa
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