Peromyscus maniculatus bairdii (prairie deer mouse): 102929132
Help
Entry
102929132 CDS
T11302
Symbol
Sox1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
pmav Peromyscus maniculatus bairdii (prairie deer mouse)
Brite
KEGG Orthology (KO) [BR:
pmav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmav03000
]
102929132 (Sox1)
Transcription factors [BR:
pmav03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102929132 (Sox1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
102929132
NCBI-ProteinID:
XP_076409844
LinkDB
All DBs
Position
17:complement(58446944..58449903)
Genome browser
AA seq
391 aa
AA seq
DB search
MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGGGGGGGTKANQDRVKRPMNAFMV
WSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKY
RPRRKTKTLLKKDKYSLAGGLLAAGAGGGGAAVAMGVGVGVGAAAVGQRLESPGGAAGGG
YAHVNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPHHPHAHP
HNPQPMHRYDMGALQYSPISNSQGYMSASPSGYGGIPYGAAAAAAAAAGGAHQNSAVAAA
AAAAAASSGALGALGSLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGEGGDPAAAA
AAAAQSRLHSLPQHYQGAGAGVNGTVPLTHI
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggaaaccgacctgcactcgcccggcggcgcccaggcgcccacg
aacctctcgggcccggccggggcgggcgggggtggtggtgggggcgggggcggcggcggc
ggcgggggcaccaaggccaaccaggatcgggtcaagcggcccatgaacgccttcatggtg
tggtcccgcggacagaggcgcaagatggcccaggagaaccccaagatgcacaactcggag
atcagcaagcgcctgggggccgagtggaaggtcatgtccgaggccgagaagcggccgttc
atcgacgaggccaagcgactgcgcgcgctgcacatgaaggagcacccggattacaagtac
cggccgcgccgtaagaccaagacgttgctcaagaaggacaagtactcgctggccggcggg
ctgctggcggccggcgcaggtggcggcggcgcggccgtggccatgggcgtgggcgtgggc
gtcggggcggcggccgtgggccagcgcctggagagcccgggaggcgcggcgggaggcggc
tacgcgcatgtcaacggctgggcaaacggcgcctaccccggctcggtagccgcggcggct
gcggccgcggccatgatgcaggaggcacagctagcctacgggcagcacccgggcgcgggc
ggcgcgcacccgcacgcgcacccggcgcacccgcacccgcaccatccgcacgcgcatcct
cacaacccgcagcccatgcaccgctacgacatgggcgccctgcagtacagccccatctcc
aactctcagggctacatgagcgcgtcgccttcgggctacggcggcatcccttacggcgcc
gcagcagccgccgccgccgcggcgggcggcgcgcaccagaactcggctgtggcggccgcg
gcggctgcggcggccgcatcgtcgggtgccctaggcgccctcggctcgctggtcaagtca
gagcccagcggcagtccgccggcccccgcgcactcgcgggcgccttgccccggggacctg
cgcgagatgatcagcatgtacctgcccgccggcgagggtggcgacccggcggcggcagcg
gctgccgcggcccagagccggctgcactcgctgccacagcactaccagggcgcgggcgcg
ggcgtcaacggcacggtgcccctgacgcatatctag
DBGET
integrated database retrieval system
