Planctobacterium marinum: MACH26_00120
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Entry
MACH26_00120 CDS
T09721
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pmaw
Planctobacterium marinum
Pathway
pmaw03030
DNA replication
pmaw03410
Base excision repair
pmaw03420
Nucleotide excision repair
pmaw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmaw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MACH26_00120 (polA)
03410 Base excision repair
MACH26_00120 (polA)
03420 Nucleotide excision repair
MACH26_00120 (polA)
03440 Homologous recombination
MACH26_00120 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmaw03032
]
MACH26_00120 (polA)
03400 DNA repair and recombination proteins [BR:
pmaw03400
]
MACH26_00120 (polA)
Enzymes [BR:
pmaw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MACH26_00120 (polA)
DNA replication proteins [BR:
pmaw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MACH26_00120 (polA)
DNA repair and recombination proteins [BR:
pmaw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MACH26_00120 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MACH26_00120 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Prok-E2_E
Sds3
Motif
Other DBs
NCBI-ProteinID:
BDX04491
UniProt:
A0AA48HDT9
LinkDB
All DBs
Position
complement(13036..15804)
Genome browser
AA seq
922 aa
AA seq
DB search
MTAKNNAPFILVDGSSYLFRAFHGLPPLTNSKGMATGAIYGVINMLKSLIKQYNPELMAV
IFDAKGKTFRDDIYPEYKANRPPMPDELREQIKPLHEIVAAMGLPLLVIEGVEADDVIGT
LAKQASEAGMQTLISTGDKDMAQLVNDKVELINTMTNTLMDVPTVKEKFGVGPELIIDYL
ALKGDKVDNIPGVPGVGDKSATSLLNGIGGVDEIYARLDEIASLEFRGAKNFANKIRDFE
QQAKLSYELATIKLDVPLDTSPADLKIKPADNNSLIEFFSDLEFKRWHQELLNAADAFSP
ANIETAQAENTVESTSSAASVEYETILTEQQLQNWLDKLSSAACFAVDTETTNLNYMQAE
LVGISFATEEHKAAYLPLRHDYPGAPEQLPFEDTLAKLKPILENEDIRKVGQHLKYDQNV
LSHYNIKINGVCNDTMLASYVLNSVAGKHDMDSLAQRYLQTSTVSFEDIAGKGVKQLTFN
QIDLDKAAHYAAEDADITLRLHNELNKQLSNSPSLIKVLQEIEIPLASALARVEQNGVYI
DVQKMQELSNSFAIRSAEIEQQVHAEAGEIFNLSSTKQLQEILFNKLSLPVLKKTPKGAP
STSEEVLQELALDYPIPRLIMEYRGLTKLRNTYTDKLPKMVDSKTGRVHTSYHQAVAVTG
RLSSTEPNLQNIPIRNEAGRSIRKAFVAPAGYKIMAADYSQIELRIMAHLSGDEGLINAF
KKGLDIHKSTAAEVFDVPLEEVTADQRRSAKAINFGLIYGMSAFGLSRQLNIPRNEAQKY
MDLYFERYPGVLRYMEETRASAAEKGYVETVYGRRLYLPEINARNGARRKAAERAAINAP
MQGTAADIIKMAMLRVDNWLSHQNSDDIKMIMQVHDELVFEIKEQKLEEYSSEIKKLMEA
ENSLEIPLIVECGEGDNWEEAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaaagaataacgcaccttttatcttagtggatggttcatcctaccttttcaga
gcctttcacgggcttccgccactaaccaactctaaaggcatggcgaccggcgctatatac
ggcgtaataaacatgctaaagagcttaataaagcaatataatccagagttgatggcggtt
atttttgacgcaaagggcaaaaccttccgcgacgacatttacccagaatacaaggccaat
cgcccacccatgcccgatgagttgagggagcaaataaaacccttgcatgaaattgtagca
gcaatgggattgccgctattggttattgaaggtgtcgaggccgacgatgtcataggaaca
ctagctaagcaagcttcagaagccggtatgcagaccttgatcagcacaggcgacaaggat
atggcccagttggtaaatgacaaagtcgaactgattaacaccatgacaaacaccctaatg
gatgtgccaactgtcaaagaaaagtttggtgtcggtccggagctgatcatcgattatctg
gcattaaaaggggacaaagttgataacataccgggcgtaccaggcgttggtgataaaagt
gctaccagcctgttaaacggtataggtggcgtagatgaaatctatgcaaggcttgacgaa
attgcgtcattggagtttagaggggcgaagaactttgctaacaaaatccgtgattttgaa
cagcaggctaaactctcttatgagcttgccaccattaaactagacgttcctttggatacc
tctcctgcggatttgaaaataaagccagcagataataatagtctcattgaattttttagt
gatcttgaatttaaacgttggcaccaggaattgttaaacgcggcagatgctttttcacca
gctaacattgaaacagcacaagcagaaaatacggttgagagcaccagcagcgctgcgtct
gtcgaatacgaaacaattttaactgaacagcaacttcaaaactggctagataagttgtca
tcggctgcctgttttgcagtagatactgaaaccacaaacttaaattacatgcaagcagag
ctggtaggtatctctttcgctacagaggagcacaaagcagcttatttgccattgagacac
gattaccccggcgctccagagcaactaccttttgaagacaccctggcgaagctaaaacct
atcctcgaaaatgaggatattagaaaagtcggccaacacctcaaatacgatcaaaatgta
ttgagtcattacaatataaaaattaacggggtatgtaatgacaccatgctggcctcctat
gttctcaacagcgttgctggtaaacacgatatggatagcctggcacagcgatatttacaa
acatccaccgtatcttttgaagacattgctggtaaaggtgttaagcaactcacctttaac
caaattgatttagacaaagccgcccattatgcagcggaagatgcagatattacgctgcgt
ttgcacaacgaactaaacaagcaactaagtaatagcccctcgcttatcaaggttttgcag
gaaattgaaattcccttagcgtctgcattggcacgcgttgaacaaaatggggtttatatc
gacgtacaaaaaatgcaggaactgtccaatagttttgctatccgctcagctgagattgag
caacaagttcatgctgaagctggcgagatatttaatttaagctctactaaacaattgcaa
gaaattctgtttaacaagctttctctacccgttctgaagaaaacgccaaaaggtgcgcct
tccacttcagaagaagtacttcaggagttggctttggactatcctattccacgcctgatt
atggagtatcgtggtctcactaagttgcgcaacacctataccgataaactgcctaaaatg
gtagacagcaaaaccgggcgagtgcacaccagttaccaccaagccgttgctgtaaccgga
agactgtcttcaacagagccaaatttacaaaatattccaatccgtaacgaagcaggtaga
agcataagaaaagcgtttgttgcacctgcaggctataaaataatggccgcggattattcc
cagattgaactgcgcattatggcgcatctatccggagatgaaggcctgattaatgccttt
aaaaagggactggatattcacaaatccactgctgctgaggtttttgatgtgccgttagaa
gaagtcacggcagatcagcgaagaagtgctaaagccattaactttggactgatttatggc
atgtctgcttttggtctatcgcggcagttaaacatccccagaaatgaagcacagaaatac
atggacttgtactttgagcgctacccaggtgtactgcgttatatggaggaaacaagggct
tccgccgcggaaaagggctacgtagagacagtatacgggcgtaggctttatttgcctgag
ataaacgccagaaatggtgccagaagaaaagcggcagaacgcgctgccatcaatgcgcct
atgcaaggcactgccgctgatattattaagatggctatgctgcgggttgacaactggctt
agtcatcaaaacagtgatgacattaaaatgatcatgcaagtacatgatgaacttgttttt
gaaataaaagaacagaaacttgaagagtactcaagtgagataaagaaactcatggaagca
gagaatagcttagaaataccgttgattgtagagtgtggtgagggtgataactgggaagag
gctcattaa
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