Planctobacterium marinum: MACH26_00470
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Entry
MACH26_00470 CDS
T09721
Symbol
slmA
Name
(GenBank) nucleoid occlusion factor SlmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
pmaw
Planctobacterium marinum
Brite
KEGG Orthology (KO) [BR:
pmaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaw03000
]
MACH26_00470 (slmA)
03036 Chromosome and associated proteins [BR:
pmaw03036
]
MACH26_00470 (slmA)
Transcription factors [BR:
pmaw03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
MACH26_00470 (slmA)
Chromosome and associated proteins [BR:
pmaw03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
MACH26_00470 (slmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
TPR_22
HTH_11
HTH_24
HTH_20
TetR_C_15
HTH_AsnC-type
DUF6262
Mga
TetR_C_13_2
Ribosomal_S30AE
HTH_Tnp_1_2
HTH_10
AAA_lid_9
HTH_23
Motif
Other DBs
NCBI-ProteinID:
BDX04526
UniProt:
A0AA48HH29
LinkDB
All DBs
Position
complement(59353..59943)
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AA seq
196 aa
AA seq
DB search
MPATRKNNRKAQILQSLAVMLETHHGQRITTAKLAEKVGVSEAALYRHFPSKARMFEGLI
EFIEETLFSRINKIVDEEKDTGNRCQLILHLILGFAEKNPGITRILNGDALQGEQERLRT
RIAQLFERLETQLRQILRERKLREGKALPADETLIANILICYVDGRINQFVRSEFSARPT
DGFGAQWKFMRERFFG
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaactcgtaaaaacaaccgcaaagcccagatattgcaatcactcgcggtaatg
ttggaaacccatcatggacaacgtataacaacggccaaattggcggaaaaagtgggcgtt
tcagaagcagcactttatcgtcactttcccagtaaggcgcgcatgtttgaaggcttaata
gagtttattgaagaaaccctgttcagccgcatcaataagattgtcgatgaagaaaaagat
accggtaaccgctgccagttaatcttacatttgattctgggttttgctgagaaaaacccc
ggtataacccgtattctcaacggtgacgccttacagggtgaacaggagcgcttgcgcact
cgcattgcgcagcttttcgaacgccttgaaacccaactcagacaaatcctgagggagcgt
aaattacgcgaaggcaaagccctgcctgccgacgaaacattgattgccaatattctgatt
tgctatgtggatggccgcatcaatcagtttgtgcgttcagagttcagcgcccgtcccaca
gatggctttggtgcgcagtggaagtttatgcgagagcgtttttttggctaa
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