Planctobacterium marinum: MACH26_02230
Help
Entry
MACH26_02230 CDS
T09721
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pmaw
Planctobacterium marinum
Pathway
pmaw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmaw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MACH26_02230 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaw03019
]
MACH26_02230 (pcnB)
Enzymes [BR:
pmaw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
MACH26_02230 (pcnB)
Messenger RNA biogenesis [BR:
pmaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MACH26_02230 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF6932
Motif
Other DBs
NCBI-ProteinID:
BDX04702
UniProt:
A0AA48HJF7
LinkDB
All DBs
Position
242132..243445
Genome browser
AA seq
437 aa
AA seq
DB search
MTSEAVLVPRAEHNVSREDISPNALKVLYRLHGAGHQAYLVGGCVRDLLLGQHPKDFDVV
TDATPEQIKALFRNCRLIGRRFRLAHIVFGREIIEVATFRGHHQIAESGSAQTSKQSEAG
QLLRDNVFGTIEEDAERRDFTVNAMYYNIADYSIRDFAKGREAIAKRELELIGDPETRYR
EDPVRMLRAVRFAAKLDFNITQRAAQPIPELAELLSNVAPARLFEEVIKLFINGAGVKTF
ELMQKYHLFGQLFPQVQPLLENPQGKEYQFLQKVLINTDNRINSGLRVTPAFFYAAVMWY
AVEERQQQHINEGGFNRHDAFIMAMNDVLHRQMQRIMIPKRFTTVIRDIWLLQHRLPKRF
GKRAWVTLEHARFRAAYDFLVLRGEVEGGEIAEVGQWWTDFQEAGPAQRKKMLANLRGKD
GKPTRRKRHYHNKNRDN
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgacctctgaggctgtcctggtgccgcgtgcagagcataatgtttcgcgggaagacatc
agtcccaatgctttaaaagtgctttaccgtttgcacggcgcaggccatcaggcttatctg
gtgggtggctgtgtgcgtgatctgctgttgggtcagcaccccaaagacttcgatgtagtt
accgatgccacaccagaacaaatcaaggctttatttcgcaattgtcgccttattggacgt
cgttttcgcctggcgcatatcgtattcggtcgcgagatcatcgaagtggcgactttccgc
ggccatcatcagattgctgagtctggtagtgcacaaaccagtaagcaaagcgaagctggt
cagttactgcgggataacgtttttggcaccatagaagaagatgccgagcgccgagatttc
accgtcaatgccatgtattacaatattgcggattacagtattcgcgattttgccaaaggc
cgagaggcgattgctaaacgcgagctggagttgattggcgacccggaaacccgctatcgc
gaggatccagtgcgcatgttacgagcggtgcgttttgctgcaaaactagactttaacatc
actcagcgcgcagcccagcctattccggagttggctgagttactaagcaatgtcgcgcct
gccagattattcgaagaagtcattaagttgtttattaacggcgcgggggttaaaactttt
gagctgatgcaaaaataccatttgtttggtcagttattcccgcaagtacagccgttgtta
gaaaacccacaaggtaaggaataccagtttttacaaaaagtattaatcaacaccgataat
cgtatcaattctggcttacgagtgacgccggctttcttctacgccgcggttatgtggtat
gccgtagaagagcggcagcagcaacatattaatgaaggcggttttaatcgccacgatgct
tttatcatggctatgaatgacgtgttacacagacaaatgcaacgcatcatgatccccaag
cgctttaccacggtgatccgcgatatctggctgttgcaacaccgcctgccgaaacgcttc
ggcaaacgcgcttgggtaacccttgaacatgctcgattccgcgcagcctacgattttctg
gtattgcgcggtgaagtagaaggcggcgagatagcagaagtgggtcagtggtggacagat
ttccaggaggcgggccctgcgcagcgcaaaaaaatgctggctaatttgcgaggcaaagac
ggcaaacccacccgcagaaaacgtcattaccacaataagaatcgtgataactga
DBGET
integrated database retrieval system
