Planctobacterium marinum: MACH26_02590
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Entry
MACH26_02590 CDS
T09721
Symbol
sbcC
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pmaw
Planctobacterium marinum
Brite
KEGG Orthology (KO) [BR:
pmaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmaw03400
]
MACH26_02590 (sbcC)
DNA repair and recombination proteins [BR:
pmaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MACH26_02590 (sbcC)
Archaeal homologous recombinant proteins
MACH26_02590 (sbcC)
BRITE hierarchy
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
nSTAND3
ABC_tran
AAA_21
DUF4200
NTPase_1
TsaE
cobW
SMC_N
AAA_25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BDX04738
UniProt:
A0AA48HRY2
LinkDB
All DBs
Position
277589..281293
Genome browser
AA seq
1234 aa
AA seq
DB search
MKILSLAFQNLNSLQGRWKIDFTAEQFDANGLFAITGPTGAGKTTLLDAICVALYHQTPR
LGALSQSSNEIMTRGQAQCGAEVAFEVKGKVYRASWFMRRARGKADGNLQPADVELAEVE
SGKILASQIKQKAELVEQITGLDFARFTRSMMLSQGQFAAFLNAREEERAALLEELTGTD
VYGRISEKVAQRRSEAKRHLEQLEARLAGAQLLSDEQREALRNDIEQQSLEAEKTKADLQ
NTEMHLYWWQQLVKLEEELSGAQSQLTNAQQARQAAEPQMECLRQGEAAEKLRFNWQNQQ
QNTTAQQQMQARITAQEQACASATQQQQQAEQQFSTLNEQLKKQQVRFGELETMIRQTLI
PLERELLSTENQKSDAQQQLGQLQQSNNELQSQWQQIKQSLSQTENEMQRLQAWLREHKW
LKGLEHKLSGWQVSAKHIAELQQVIQEKQQALQESEQQHQRLLEQGQAMAKAESEARQKW
MAQQQQVMQLEQASNAIVSEENREQCQRQQVELSQQIPVLMRLKEIQRQWLFYQAEIYTQ
TTALAETEQNKATAQEKIALLRNDYARQEKLLKSLQKQLALTQEITRFREVLDKDSPCPL
CGSMEHPESLPELVESEVAEELQQAEQELEQLKQQGTKAREQLESLTEKCRLLGSGIEQA
KTQSSQAESDWRAQLANFQIADTLLISDREQLSRLYKKSEVELAELQRLLAEDAAQQEKL
KAAQQMSSQLQVLCDSAANDVSLQQAKLDAHQKQMQQLHKELESQIQSCQIQSLAFIEEM
QQVAFPEPVQAIPDPHWFDALQQQLSQWQANSEAMQSLTSTSDKLQTQLAAITPQLESNE
QQLKDEQTRLEVIKENLQAMQQQKLTLAGEQSSEQLLDEGRQQLATLVENVEANRSAAQQ
LRDLMLASRNKLQSLQQQHQEIQQQGVELRGVFSSRLEESPFDDEEAFQSALLQERQLQQ
LREQDKTLEQRLQEAQTLLANTQNRLAQHHGNVPEQQDKELPDRDEAIARYTHQKQQFNE
QLQLLAERLGELRGQLQRDERNRQQQSELAHTISEFKNEFDDIQYLYDLIGHAKGEKFRK
FAQGLTLDNLIHLANRRLQQLHGRYLLSRENVEGLGIKVTDTWQADNQRDTKTLSGGESF
LVSLALALGLSDLVSHKTSIDSLFLDEGFGTLDAETLDLALDTLDNLNASGKTIGIISHI
ETLKERIPVQIKVNKKNGLGVSELEAQYRASVAG
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatactgagtctggcgtttcaaaatctcaactctttgcagggcaggtggaaaata
gatttcaccgctgagcagtttgatgccaatggtttgttcgccattaccggccccactgga
gcgggtaaaaccacactattagacgctatttgtgtggccctttaccatcaaaccccaagg
ttgggcgcgctgagtcaatccagtaatgaaattatgacccgcggacaagcgcaatgtggc
gctgaagtggcgtttgaagttaaaggaaaggtttacagagccagttggtttatgcgtcgt
gcccgaggaaaagcggatggtaatctgcaaccagcggatgtggaactggcggaggtggaa
agtggcaaaatactggcgtcgcagataaaacaaaaagccgaattggtagagcaaatcacc
ggattagatttcgccagatttactcgctctatgatgctttcgcaaggtcagtttgcggcg
tttctcaatgctcgagaggaagaacgggctgcattactggaggaactgacaggtaccgat
gtttacgggcgaatttccgaaaaagtggcacaaagaaggtctgaagctaagagacatttg
gagcagctggaagcgcgtttggcgggagcccagttgttaagtgatgagcagcgagaggct
ttacggaatgacatagaacagcaaagtcttgaggctgaaaaaaccaaagctgaccttcaa
aatactgaaatgcatctgtattggtggcagcaactagtaaagctggaagaggagttatcc
ggggcacaatctcagctgacaaacgcacagcaagcacggcaggcagccgagcctcaaatg
gagtgcctcaggcaaggcgaggcggccgagaagctgcgcttcaattggcaaaaccaacaa
caaaacacaaccgcgcaacagcaaatgcaagcacgcatcaccgcacaagaacaggcgtgt
gcttccgccacccaacaacaacagcaagcagagcaacagttttcgactttgaatgagcag
ctcaagaagcaacaagttagattcggcgagcttgagaccatgatccgccagaccctgatc
ccgttagagcgagagttgctcagtactgaaaatcaaaaatccgacgctcagcagcagctg
gggcagctgcaacaaagtaacaatgagctgcaaagccaatggcagcagattaaacaatcc
cttagtcaaacagaaaatgaaatgcagcgtttgcaagcttggttgcgagagcataaatgg
ctaaaagggctggagcacaagctatctggttggcaggtgagcgcaaagcatatagctgaa
ctgcaacaggtaattcaggaaaagcagcaggctttgcaagagagcgaacagcagcatcaa
aggttgcttgaacaaggtcaggcaatggctaaagctgaatctgaagctcgtcaaaagtgg
atggcgcagcaacagcaagtgatgcaattagagcaagcgtcaaacgcgattgtgagtgaa
gagaatagagagcagtgccaacgacaacaggttgaactcagccagcaaatcccggtatta
atgaggctgaaggaaattcagcgccaatggttgttttatcaagcagaaatatacactcaa
acaacagcattggctgaaacggagcaaaataaagcgacggcacaagagaaaatagcgctg
ctgcgaaatgattatgcaaggcaggaaaaattgcttaaaagtttgcaaaagcaactggcc
ctgacccaggaaataacccgcttcagagaggtactggataaagattccccctgtccttta
tgtggctcaatggagcatccagaatccctccccgaactggtggaaagtgaagtggccgag
gagctgcaacaggctgaacaagagctggagcagttaaagcaacagggcacaaaagcccgt
gagcagcttgagtcgctcacagagaaatgtcgattattgggctcgggcattgagcaagcc
aagacacaatctagccaggctgaatctgattggcgtgcgcaattagcaaattttcagatt
gcggatactctattgatttcggatagagaacagcttagccggttgtataaaaagtcagaa
gtggaattggcggagcttcaacggctattagctgaggacgcggctcagcaggaaaaactg
aaggctgcacagcaaatgagcagtcagttgcaggttttatgtgacagtgctgctaatgat
gtgtccttgcagcaagctaaactcgatgctcatcaaaagcaaatgcaacagttgcataag
gaactagaaagtcaaattcaatcttgccaaatacaatcccttgcctttatagaggaaatg
caacaggtggcatttccagagcctgtgcaagcaattccagatccccattggtttgacgct
ttgcagcaacagctatcgcagtggcaggctaattccgaagcgatgcagtcgttgacctcg
acttccgataaactgcaaacccagctggcggctattactccacagctggaaagcaacgag
cagcaactgaaggatgagcagaccaggctggaggttataaaggaaaacctgcaggccatg
cagcaacaaaaactaacactggccggtgagcaatccagcgagcaattactcgatgaggga
cgtcaacaattagccacattagtagagaacgtggaagccaatcgaagcgctgcacagcag
ctacgggacctgatgttagccagtcgaaataagctgcaaagcttgcaacagcaacatcag
gaaatacagcaacaaggtgtcgagcttcgcggggttttctcttcccgactggaggaaagc
ccttttgacgatgaggaagcgtttcagtcagcgttattgcaagagcggcagttacagcaa
ttacgggagcaagataaaacactggagcaacggcttcaggaggcacaaacattattggcc
aacactcaaaacaggcttgctcagcaccatggcaatgtgcccgaacaacaggataaggaa
cttcccgacagggatgaggcgatagccaggtacacccaccaaaagcaacaatttaatgag
caattgcaactgttagcagagaggttgggggagctaagggggcagttgcagcgggatgag
cgcaaccgtcaacagcaaagtgaactggcacacaccatctcagaattcaaaaacgagttc
gatgatatccagtatttgtatgatcttattggtcatgccaaaggagaaaagtttcgtaaa
ttcgctcagggactgaccctggacaatttgattcatcttgctaatcgcaggttgcagcaa
ttgcacggtcgttacctgcttagccgagaaaacgttgaaggtttaggcattaaggtaacc
gatacctggcaggcagacaatcagcgcgataccaagaccttgtcgggcggggaaagcttc
ttagtgagcctcgcattggctttgggcttgtctgatttagtgagccacaaaaccagcatc
gattctctgtttctggacgaagggtttggcacccttgatgccgaaactctcgaccttgca
ctggacaccttggataaccttaatgcttcaggcaaaaccatcggtattatcagtcatatc
gaaaccttgaaagagcgcattccggtacagatcaaagtgaataagaaaaacggcctcggg
gtgagtgagttagaagcgcaatatcgggcttcggttgcgggttga
DBGET
integrated database retrieval system
