Planctobacterium marinum: MACH26_03080
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Entry
MACH26_03080 CDS
T09721
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
pmaw
Planctobacterium marinum
Brite
KEGG Orthology (KO) [BR:
pmaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaw03000
]
MACH26_03080
Transcription factors [BR:
pmaw03000
]
Prokaryotic type
Helix-turn-helix
LysR family
MACH26_03080
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_5
MarR
HTH_24
Motif
Other DBs
NCBI-ProteinID:
BDX04787
UniProt:
A0AA48KQ76
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Position
350145..351023
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AA seq
292 aa
AA seq
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MSKRLNYHHLYYFWQVAKNGKLTDVAKELHVSQSALSAQIKQLEHQMDTLLFLRDGRRLS
LTDTGKRVFGYAQDIFAKGKELELLLSQGIESDNHLSIGVMTNLSRNFVEAFIKPLMSNK
DVSFSLHTRGLANLLKGLNKRDFDIVLTNCSIAEQQPEQNLQQHLVAQQPVAIIGHPDIK
PVSDFPIGYEDVHWLLPNKGTAIRSAFEFFCMRNNYKPKIMAEVDDMAMLRLLTRDTDAC
AVMPPVVVKDEINNQLLSVYQEIPEAFEPFYATTIDQAAFPKIFGELMNFEF
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcgactgaattaccaccatttgtattatttctggcaggtagccaagaacggc
aaattaaccgatgtcgccaaggaattacacgtttctcaatctgccttgtcggcacaaatc
aaacaactggaacatcagatggacacgctattgtttttacgagacggtcgtagattatca
ctaaccgacaccggcaagcgggtatttggctatgctcaggatatctttgccaaaggtaaa
gaactggagctgctgctcagtcaagggattgaatccgacaatcatctctctattggggtg
atgacaaacctctctcgaaattttgtcgaggcatttatcaaacctctaatgagtaacaaa
gacgtgagcttctctttgcatacccgaggtttggctaatttgctcaaaggcttaaacaag
cgcgattttgatattgtgcttaccaattgctctattgctgaacagcagcctgaacaaaat
ttacaacagcatttggtggcgcaacaacctgtggctattatcggacacccagatatcaag
cctgtgagtgatttccccataggctatgaggatgttcactggttgctacctaacaagggc
accgccattcgctctgcgtttgaatttttctgtatgcgcaataattacaaacccaaaatt
atggcggaagtggatgacatggccatgttgcgactgttaacccgcgatactgatgcctgc
gcggtaatgccgccagttgttgtaaaggatgaaattaacaatcagttattgtcggtttat
caggaaattcctgaggcatttgagcctttttatgccactaccatcgaccaggcggcgttc
cccaaaatattcggagaactgatgaactttgaattttaa
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