KEGG   Planctobacterium marinum: MACH26_04550
Entry
MACH26_04550      CDS       T09721                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pmaw  Planctobacterium marinum
Pathway
pmaw00300  Lysine biosynthesis
pmaw00470  D-Amino acid metabolism
pmaw01100  Metabolic pathways
pmaw01110  Biosynthesis of secondary metabolites
pmaw01120  Microbial metabolism in diverse environments
pmaw01230  Biosynthesis of amino acids
Module
pmaw_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pmaw00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    MACH26_04550 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    MACH26_04550 (lysA)
Enzymes [BR:pmaw01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     MACH26_04550 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: BDX04934
UniProt: A0AA48HN65
LinkDB
Position
527731..528981
AA seq 416 aa
MDFFQYQNEQLHAEQVAVADIASEFGTPCYVYSRATIERHWQAFDKAAGQQPHLICYAVK
ANSNLGVLSVMAKLGSGFDIVSGGELLRVIAAGGDPKKVVFSGVGKTEQEIQLALQHNIY
CFNVESPAELQRINKVAAQMDVKAPISIRVNPDVDAKTHPYISTGLKANKFGIEREQAIA
IYQQAAAMSHLQVKGIDCHIGSQLTDLAPFVDALDRLLALIDELKENGIEVSHLDVGGGL
GVPYQNETPPHPNEYAAALAERLKGREELTLVFEPGRAIMANAGILVTQVEFLKSGAEKN
FAIVDAAMNDLIRPALYSAWMNIIQVNAALERNKAIYDVVGPICETGDFLGKERELAIAA
GDLLAVRSAGAYGFVMASNYNTRARPPEIMVDGEQVYLVRERETLQELWKLERKLP
NT seq 1251 nt   +upstreamnt  +downstreamnt
atggacttttttcaatatcaaaatgagcagctacatgccgagcaggttgctgtggcagat
atcgcaagtgaattcggtacgccttgttatgtgtattcacgggctaccattgagcgtcac
tggcaagcgtttgataaagcggcgggccaacagccccatttgatttgttatgcggttaag
gcgaattctaatctcggtgtattgtctgtgatggcaaagctggggtccggatttgatatc
gtctccggcggtgaattattgcgggttatcgccgctggtggcgacccgaaaaaagtggtg
ttttccggcgtaggtaaaaccgagcaagaaatccaactggcgctacaacacaatatttat
tgtttcaacgtagaatcgccggcggagctgcagcgcattaataaagtcgcagcgcaaatg
gatgtgaaagcccccatttctatccgggtgaatcccgatgttgatgccaaaacccatccg
tatatttctacgggtttaaaagctaacaaatttggtattgagcgcgagcaagccattgcg
atttatcagcaagcagcggccatgagccacctgcaagtaaaaggtattgattgccacatt
ggttcacagttaacggatctggccccatttgttgatgccctggacagattactggccttg
attgatgagttaaaagaaaacggtatagaggtttctcacctggatgtgggaggcggttta
ggcgtgccatatcaaaacgaaacacctccgcatccaaatgaatatgccgccgcactggca
gagcgtttaaaagggcgagaagagctaaccttagtgtttgaaccggggcgcgccatcatg
gccaatgccggcattttggttacccaagtggaatttttaaaatccggtgccgagaaaaac
ttcgccattgtcgatgccgccatgaatgatctcattcgtcccgcgctttattcggcctgg
atgaatatcatccaggtaaatgcggcgctggaacgcaacaaagcgatttacgatgtggtt
ggaccgatatgtgaaaccggcgactttctcggtaaagagcgagaattagccatcgcggca
ggtgatttattagcggtgcgcagcgctggtgcttacggatttgttatggcctccaattac
aatacccgagccaggccaccggagataatggtggacggtgagcaagtgtatttagtgcga
gaacgggaaactttgcaagaattgtggaaactcgagcgcaaactcccgtaa

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