Planctobacterium marinum: MACH26_04550
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Entry
MACH26_04550 CDS
T09721
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pmaw
Planctobacterium marinum
Pathway
pmaw00300
Lysine biosynthesis
pmaw00470
D-Amino acid metabolism
pmaw01100
Metabolic pathways
pmaw01110
Biosynthesis of secondary metabolites
pmaw01120
Microbial metabolism in diverse environments
pmaw01230
Biosynthesis of amino acids
Module
pmaw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pmaw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MACH26_04550 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MACH26_04550 (lysA)
Enzymes [BR:
pmaw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
MACH26_04550 (lysA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BDX04934
UniProt:
A0AA48HN65
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Position
527731..528981
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AA seq
416 aa
AA seq
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MDFFQYQNEQLHAEQVAVADIASEFGTPCYVYSRATIERHWQAFDKAAGQQPHLICYAVK
ANSNLGVLSVMAKLGSGFDIVSGGELLRVIAAGGDPKKVVFSGVGKTEQEIQLALQHNIY
CFNVESPAELQRINKVAAQMDVKAPISIRVNPDVDAKTHPYISTGLKANKFGIEREQAIA
IYQQAAAMSHLQVKGIDCHIGSQLTDLAPFVDALDRLLALIDELKENGIEVSHLDVGGGL
GVPYQNETPPHPNEYAAALAERLKGREELTLVFEPGRAIMANAGILVTQVEFLKSGAEKN
FAIVDAAMNDLIRPALYSAWMNIIQVNAALERNKAIYDVVGPICETGDFLGKERELAIAA
GDLLAVRSAGAYGFVMASNYNTRARPPEIMVDGEQVYLVRERETLQELWKLERKLP
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggacttttttcaatatcaaaatgagcagctacatgccgagcaggttgctgtggcagat
atcgcaagtgaattcggtacgccttgttatgtgtattcacgggctaccattgagcgtcac
tggcaagcgtttgataaagcggcgggccaacagccccatttgatttgttatgcggttaag
gcgaattctaatctcggtgtattgtctgtgatggcaaagctggggtccggatttgatatc
gtctccggcggtgaattattgcgggttatcgccgctggtggcgacccgaaaaaagtggtg
ttttccggcgtaggtaaaaccgagcaagaaatccaactggcgctacaacacaatatttat
tgtttcaacgtagaatcgccggcggagctgcagcgcattaataaagtcgcagcgcaaatg
gatgtgaaagcccccatttctatccgggtgaatcccgatgttgatgccaaaacccatccg
tatatttctacgggtttaaaagctaacaaatttggtattgagcgcgagcaagccattgcg
atttatcagcaagcagcggccatgagccacctgcaagtaaaaggtattgattgccacatt
ggttcacagttaacggatctggccccatttgttgatgccctggacagattactggccttg
attgatgagttaaaagaaaacggtatagaggtttctcacctggatgtgggaggcggttta
ggcgtgccatatcaaaacgaaacacctccgcatccaaatgaatatgccgccgcactggca
gagcgtttaaaagggcgagaagagctaaccttagtgtttgaaccggggcgcgccatcatg
gccaatgccggcattttggttacccaagtggaatttttaaaatccggtgccgagaaaaac
ttcgccattgtcgatgccgccatgaatgatctcattcgtcccgcgctttattcggcctgg
atgaatatcatccaggtaaatgcggcgctggaacgcaacaaagcgatttacgatgtggtt
ggaccgatatgtgaaaccggcgactttctcggtaaagagcgagaattagccatcgcggca
ggtgatttattagcggtgcgcagcgctggtgcttacggatttgttatggcctccaattac
aatacccgagccaggccaccggagataatggtggacggtgagcaagtgtatttagtgcga
gaacgggaaactttgcaagaattgtggaaactcgagcgcaaactcccgtaa
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