Planctobacterium marinum: MACH26_11830
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Entry
MACH26_11830 CDS
T09721
Symbol
dapE_1
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pmaw
Planctobacterium marinum
Pathway
pmaw00300
Lysine biosynthesis
pmaw01100
Metabolic pathways
pmaw01120
Microbial metabolism in diverse environments
pmaw01230
Biosynthesis of amino acids
Module
pmaw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pmaw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MACH26_11830 (dapE_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmaw01002
]
MACH26_11830 (dapE_1)
Enzymes [BR:
pmaw01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
MACH26_11830 (dapE_1)
Peptidases and inhibitors [BR:
pmaw01002
]
Metallo peptidases
Family M20
MACH26_11830 (dapE_1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M42
Motif
Other DBs
NCBI-ProteinID:
BDX05662
UniProt:
A0AA48HLC7
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Position
1353054..1354289
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AA seq
411 aa
AA seq
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MSMPITPQKSETVARQSHITELCGLPGQSLTGHARSILYSLELMSRKSITPKDAGCQDWL
MEKLASLGFVCHPFEVNGVKNLVAEIGAGERVIAFAGHTDVVPPGPVEKWHSDPFEPVVI
DNELIGRGAADMKTGVAAMLAASERVLRLSRHLNAKFMWFITSDEEGEAEFGSKEIKAWL
DKRNISVDCVIIGEPTAKLATGDTIKVGRRGAISGRIQVKGKQGHVAYPQYADNAIHKMA
KVIDAISSINFDAGSDDFPGTSLQITHIDSGDFTDNIVPANCSICFNIRYSHEYSMASLE
ALIQERIEAVVSSADIQWERPCVPYFTHVDQQNSLIKSVEQAIIKNTGRFPVLSTAGGTS
DGRFFASEHTQVVEVGVPNKTIHQVNERIHISDLVTLEDIFTDLLSGLLFD
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgccgattacaccgcaaaagtcagaaactgttgctcgacaaagccatataact
gagctgtgtgggctgccaggtcagtcattgaccgggcatgcgcgctctatactttacagc
ttagagctgatgtccaggaagtccattaccccgaaagacgcaggatgccaggactggctg
atggaaaaactcgcttctttgggatttgtatgccacccatttgaggtgaatggtgttaaa
aacctggtagctgaaatcggggcgggggaaagggtgattgcattcgcgggacatactgac
gtcgttccgcctggtccggttgaaaaatggcacagcgatcccttcgagcctgttgtgata
gacaatgagttgattggccgtggcgctgcagatatgaaaacgggtgtcgccgccatgcta
gctgcatcagagcgagtattgaggttatctcgccaccttaacgcgaagtttatgtggttc
attaccagcgatgaggaaggcgaagcggagtttggaagtaaggagatcaaagcctggctg
gataagcgcaatatatccgtggattgcgtcattatcggtgagcctacggccaagttggcc
acaggtgataccatcaaggtgggcagacgtggtgccatttccggacgtattcaggttaag
ggtaaacagggtcatgtggcgtatccgcaatatgcagacaacgcaatccacaaaatggca
aaggtaatcgatgccattagttccataaacttcgatgccggtagtgatgattttccggga
acaagcctgcaaattacgcacattgattctggtgatttcaccgataatatcgtgcctgcc
aattgcagtatttgctttaatatccgctacagccatgagtacagtatggcgtcactggaa
gcgttgattcaggagaggattgaagcggtagtaagcagtgcagatattcaatgggaacgt
ccttgcgtgccctattttacccatgttgatcagcaaaatagcctgatcaaatctgttgag
caagccataatcaaaaataccggacgttttcctgtgctatctacggctgggggcacgtct
gatggacgcttttttgccagtgagcatactcaagttgtggaagtgggcgtacctaacaaa
accattcatcaggttaatgaacgcattcacatttctgatttggtgacactggaagatatt
tttaccgatctactatcaggtttactttttgattag
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