Planctobacterium marinum: MACH26_15860
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Entry
MACH26_15860 CDS
T09721
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pmaw
Planctobacterium marinum
Pathway
pmaw00061
Fatty acid biosynthesis
pmaw00071
Fatty acid degradation
pmaw01100
Metabolic pathways
pmaw01212
Fatty acid metabolism
pmaw02024
Quorum sensing
pmaw04146
Peroxisome
Module
pmaw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pmaw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MACH26_15860 (fadD)
00071 Fatty acid degradation
MACH26_15860 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MACH26_15860 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
MACH26_15860 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pmaw01004
]
MACH26_15860 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmaw04147
]
MACH26_15860 (fadD)
Enzymes [BR:
pmaw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MACH26_15860 (fadD)
Lipid biosynthesis proteins [BR:
pmaw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
MACH26_15860 (fadD)
Exosome [BR:
pmaw04147
]
Exosomal proteins
Exosomal proteins of breast milk
MACH26_15860 (fadD)
Exosomal proteins of breast cancer cells
MACH26_15860 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
BrxB
Motif
Other DBs
NCBI-ProteinID:
BDX06065
UniProt:
A0AA48KU42
LinkDB
All DBs
Position
1801259..1802911
Genome browser
AA seq
550 aa
AA seq
DB search
MEKIWLKNYHSTVQPEVDPDKYTSLVDIFEQSIAKYADKTAYINMGHSITFGELEEYSKH
FAAYLQGQGLKKGDAVAVMMPNLIQYPIAIFGILRAGMSVVNVNPMYTERELEHQLNDSG
AKAIVIVENFANTLSAIIDKTPVQLTMLTKIGDMFPIPKRWIVNAVLKYVKKVIPEFNLP
GAVPFPDVLSRGKNLTFTKPEITNDDIAFLQYTGGTTGVSKGGMLTHRNMVANLEQISGI
LEPVITPGEEIVVTALPLYHIFALQGNCLTFMKFGCPNLLITNPRDMPGFIEELGKYDFS
IITGVNTLFNGLLNTPGFNELDFSRFKFGLGGGMAVQRAVAERWHEVTGTALLEGYGLTE
CSPVVTVNPPQLERYKGSIGMPVASTDIKLLDEEGNEVPMGEAGEMYVKGPQVMKGYLNR
PEATDEIIKDGWLATGDIAKCDEDGYFYIVDRKKDMILVSGFNVFPNEVEDVAVMHPGVL
EAAAIGVPHEVSGEIVKLFIVKKDESLTDKEVIAHCKSHLTGYKVPKIVEFRDELPKSNV
GKILRRQLRD
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaagatttggttgaagaattaccactctactgttcagccggaagttgacccggat
aagtacacctcactcgtcgatatttttgaacaatcgatagcaaaatacgctgataaaacc
gcatatatcaatatgggccacagcattacatttggtgagttagaagagtattcgaaacac
tttgcagcgtatctgcaagggcaggggcttaaaaagggcgacgccgtcgcggttatgatg
cctaacctcattcaatatcccatcgcaatttttggcatattgagagcgggtatgtcggtg
gttaacgttaaccctatgtatactgagcgcgagctggaacaccagcttaatgactccggt
gcaaaagccattgttattgtagaaaattttgctaatacgctttcagccattatcgacaaa
acacctgtacagctgactatgctgactaaaatcggtgacatgtttccaattccgaaacgc
tggatagttaacgcggtattaaagtacgtcaaaaaggtgatccctgagtttaacttgccc
ggtgcggtgccatttcctgatgtgctgagtcgcggcaagaacctaacctttaccaaacca
gaaataactaacgatgatatcgcctttttgcaatatacaggtggtactacgggtgtttcc
aaaggtggcatgttgactcaccgtaacatggtagccaacctggaacagatatccggcatt
cttgagccggtaattacgccgggagaagagatagtggtaaccgcgttaccgctttaccat
atttttgcactgcaaggtaactgcttaactttcatgaagtttggctgcccgaacttgtta
atcaccaatccaagagatatgccgggatttatcgaggagctgggtaaatacgatttctcc
attattactggtgttaacaccctgtttaatgggcttttaaatactcccggattcaatgag
ctggatttctcgcgcttcaagtttggcttaggcggtggcatggctgtgcagcgcgccgta
gcagaacgctggcatgaggtgacaggaacagcgctgttggaaggctatggtttgaccgaa
tgtagcccagtggtgactgttaaccctccacaactagagcgctacaaaggctcaatcggt
atgccagtggcatcaacggatataaaattacttgatgaagagggcaatgaagtgccgatg
ggcgaggcgggagagatgtatgttaaaggcccgcaagttatgaaaggctatctcaatcgc
cctgaggccactgatgaaatcattaaagatggctggctggctacaggtgatatcgcaaaa
tgtgatgaggatggttatttttacattgttgaccgcaagaaagacatgatcctggtatct
ggctttaacgtgtttcctaatgaggtggaagatgtagctgtaatgcatcccggcgtgttg
gaagctgcagctatcggcgttcctcacgaagtttcaggtgaaatcgtaaaactctttatt
gtcaaaaaagatgagagtttgactgacaaagaggtgattgctcattgtaaatctcatttg
accggatataaggttccgaaaatagttgagtttagagacgagcttcctaaatcaaatgtt
ggtaagatactgcgcaggcagttacgagactaa
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