Planctobacterium marinum: MACH26_17050
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Entry
MACH26_17050 CDS
T09721
Symbol
recC
Name
(GenBank) RecBCD enzyme subunit RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pmaw
Planctobacterium marinum
Pathway
pmaw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmaw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MACH26_17050 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmaw03400
]
MACH26_17050 (recC)
Enzymes [BR:
pmaw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MACH26_17050 (recC)
DNA repair and recombination proteins [BR:
pmaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MACH26_17050 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
PIN
Motif
Other DBs
NCBI-ProteinID:
BDX06184
UniProt:
A0AA48KS71
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All DBs
Position
1929557..1932994
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AA seq
1145 aa
AA seq
DB search
MLHLIQSNKMEVLLASLLQKLAEQTFDEQGASEDLASLLTPDTILVQSPGMSQWLKINIA
NTLDIAANIEFPLPSSFIWQLYQRSIPDLPKESAFNKQFLAWKILQLLPQYLDLPEFIPL
ARYVADEKADEPPADLGEQLKCWQLCAKIADVYDQYLMYRPEWILAWEQGEDSLPDVDVS
QQPWQPILWRAICEFTEQQGESQWHRANMHTALMAQLEQAQQGSNKPLYVFGISAMPVQQ
LEILRSLSEHSEVYIFWFNPSEHYWADVVDNKRFQKQQLSLFDEPDVQSQEKKQQAAALL
DVGNPLLASWGKPGRDFLEMLTELEPLQADLFSAPQQQHLLGWVQSEVFQLTLRGKRQPL
TVQERLSNSGDFPKKSLTHDDSSIEIHATHSRLRELEVLRDQICHWFESGAVESLNDVIV
MMPDVGVYAPLIETVFSRPLDSKGELQERGIPFAISDRSQAEEDSIVTSFLRLMAQEHSR
MTLTEVFELFKVPEIAARYGIGGDEIQALHRWCYEAGVRWGWSGLEKQHWQLPQENQNTW
IFGLQRLLAGYAHQGAEVLNGEIVPYGEVEGQLTQALGLLLAFVEDLRALTRFCRASHPL
QEKVSEALLVLDSFYLVDSDNEYRLQKLKETIAKLKVHSQHYAGKISQQVFVQVLNEALN
ESGVGQRFLAGRLNFCTLMPMRSIPFKHVCILGLNEPDYPRQTTPISFDLVSRSTPRKGD
RSRRLDDRYLFLEALLSARDKLYLSYQGRDDKSNETKEPSILVSELVDYCQQSVCFAEHL
ELDIETAEKAVKQHLLHEHPLQPWDASYFATAKDKNRAVTSFDRTMFEVASTLQSGQGAV
DFLKVNQHAAMLDESTRQDISELELHQLQQFFRNPVRGWFKSVWKTQFPLIAEIMPDDEP
LNLDSLQRYQATSQLLQGDSEQAVMRQMELEGQLPIGNLKLLEQDELSARAATIKDKMSD
AFGGSLPTLSTRWLTTELIVSGTNTDKQALSLTGAVQLTASGDLVSFRPGKLGANDYLAI
WMSWNLVCAVENRQSRAWFFAADKTLNFEPIEQQEARENLQLLVELYLKGQQQCLAFFPK
TALIWAQSQDEGKTLAGFAGNSFLPGEASDLHIGRVYPQLQGCWQSFTELADTLLQPILA
KAELS
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgttacatctgattcagtcaaataaaatggaagtattgctggccagtctcttgcaaaaa
cttgccgagcaaacttttgatgaacaaggcgcctctgaggacctggccagtttattaaca
cccgataccatcctggtgcaaagtccgggtatgtcgcaatggctcaaaattaatattgcc
aacaccctggatattgccgccaatattgaattcccgttaccttccagttttatctggcaa
ttatatcaacgcagcattcctgatttacccaaagagtcagcctttaacaaacagtttctg
gcctggaaaatattgcagttgttaccgcaatatctggatttaccggagtttatcccactg
gctcgctatgttgctgacgaaaaagctgatgaacctcctgcggatttgggagagcagctc
aagtgctggcaattgtgcgccaaaattgccgatgtttacgatcagtatttaatgtatcgc
cccgagtggatcctggcctgggagcagggcgaggatagcttgcccgatgtggatgtaagc
cagcaaccctggcaaccaatcctatggcgcgccatttgtgaattcactgagcaacaaggg
gagtctcagtggcatcgcgccaatatgcacaccgccttgatggcacaattagagcaagcg
caacaaggcagtaataaacctttgtatgtgtttggcatttccgccatgcccgtgcagcag
ctggagattttacgctctttaagcgaacacagtgaggtgtacatcttttggtttaaccca
tctgagcactattgggcggatgtggtggataacaagcgcttccagaaacagcagctgtcc
ttgtttgatgagccagatgtgcaaagtcaggagaaaaaacaacaagcggcggcgctgttg
gatgtgggcaacccgttattggcctcctggggcaaacccggtcgcgattttctggagatg
ctaactgaactggagccgctacaggcagacttatttagcgccccacaacagcagcattta
ttaggctgggtgcaaagtgaggtattccagttaacgttgcggggcaagcgccaaccctta
acggtgcaggagcgcttgagcaatagcggtgatttcccgaaaaagtctctgactcatgat
gatagctccattgaaattcacgccacgcattcccgcttgcgagagctggaagtgttgcga
gaccagatttgtcattggtttgaatcgggcgcagtggaatccctcaatgatgtgattgtg
atgatgccagatgtcggcgtttacgcaccgctcatagaaacggtattttcccgtcctctg
gacagtaaaggggaattacaagagcgcggtattccctttgccatatccgaccgtagccag
gctgaagaagacagcattgttaccagctttttgcgtttaatggcgcaagagcacagccgc
atgacactcaccgaagtgtttgagctgtttaaggtgcctgagattgcagcccgttatggt
atcggcggcgatgaaattcaggcgctgcatcgctggtgttatgaggcaggggtacgttgg
ggttggtcagggctggagaaacagcactggcaactaccgcaagaaaatcaaaacacctgg
atttttggcttacagcgtttgctggcaggttatgctcaccagggcgcagaggtgctgaat
ggtgaaatcgtgccctacggcgaagttgaaggccagttaacccaagcgctgggcctgtta
ttggcgtttgtggaagacttgcgggcgttaacccggttttgtcgtgcatcacatcccttg
caggaaaaagtgagcgaggcgctactagtgctggatagcttttatctggtggattcagat
aatgagtatcgcctgcaaaaattaaaagaaaccattgctaagctcaaagttcatagtcag
cattatgccggtaagataagtcagcaggtgtttgtacaagtgcttaacgaagctcttaac
gagtctggcgtggggcaacgcttcctggcagggcgactgaatttctgtaccctgatgccg
atgcgcagtattccctttaaacatgtgtgtattctgggtttaaacgagccggattatccc
cggcaaaccacgcccattagttttgatttggtgagccgctctacaccgcgcaaaggcgac
cgttccagacgtctggatgatcgctatttgtttttagaggcgctgctgtccgcgcgcgat
aagttgtacctcagttaccaggggcgggacgataaaagcaatgaaaccaaagaaccgtct
attttagtgtcggagttggtggattattgtcagcaatcggtgtgttttgctgaacatctg
gaactagatattgaaactgccgaaaaggcggttaaacagcatctattgcacgagcatcct
ttgcagccttgggatgcatcctattttgccactgccaaggataaaaacagggcggtgact
tcctttgacagaaccatgtttgaggtggccagcacattacagtcgggccagggggctgtt
gatttcttgaaagtgaatcaacatgcggccatgttggatgagtcgaccaggcaagatatt
tccgagctggaattacaccagttacaacagtttttccgtaatccggtgcgaggctggttt
aaaagtgtctggaagacgcaatttcccctcatcgctgaaattatgccggatgatgagccg
ctaaacctggatagcttgcagcgctatcaggccacttcacagttattacaaggtgacagt
gagcaagccgtgatgcgccagatggagctggaagggcagttgcccatcggcaatttaaaa
ctattggagcaggacgagttaagcgcgcgggctgccaccataaaagacaaaatgagcgac
gcttttggcggctcgctgccaacactttccactcggtggttaaccacggaacttatcgtt
tcaggcactaacactgataaacaagcgctgtcgctaactggtgccgtgcagttaaccgca
agtggcgacctggtgtcttttcgccccggtaaattaggcgccaacgattatctggctatc
tggatgagttggaaccttgtttgcgcagtagaaaatcgtcaatcccgggcctggtttttt
gccgctgataaaaccctgaattttgaacctattgagcaacaggaagccagggaaaatcta
caattattggtggagctttacttaaaagggcaacagcaatgcctggcctttttcccgaaa
acagcgcttatctgggcgcaaagccaagacgagggaaaaactctggcggggttcgccggt
aatagctttttacccggtgaagcctctgatctgcatattggcagggtatacccgcaattg
cagggttgctggcagagctttactgagttagctgatacgctgttgcaacccattttagct
aaggcggagctgtcatga
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