Planctobacterium marinum: MACH26_17840
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Entry
MACH26_17840 CDS
T09721
Symbol
miaB
Name
(GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pmaw
Planctobacterium marinum
Brite
KEGG Orthology (KO) [BR:
pmaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmaw03016
]
MACH26_17840 (miaB)
Enzymes [BR:
pmaw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
MACH26_17840 (miaB)
Transfer RNA biogenesis [BR:
pmaw03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
MACH26_17840 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
B12-binding
Amdase
Motif
Other DBs
NCBI-ProteinID:
BDX06263
UniProt:
A0AA48HG03
LinkDB
All DBs
Position
complement(2027668..2029059)
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AA seq
463 aa
AA seq
DB search
MNEYDSEKMADLLDSTHGYSLAEEAEDADVILLNTCSIREKAQEKVFHQLGRWKNLKNHK
PDLVIGVGGCVASQEGDAIRQRAPYVDIVFGPQTLHRLPEMISQVQAGEQAVVDISFPEI
EKFDRLPEPRAEGPTAFVSIMEGCSKYCSFCVVPYTRGEEVSRPVDDVIFEIAQLAEQGV
REVNLLGQNVNAYRGENYDGSICRFAELLHLVAAIDGIDRIRYTTSHPVEFTDDIIDAYE
TIPELVDHLHLPVQSGSDHILAMMKRGHTAIEYKSKIRRLKKVRPNLSMSSDFIIGFPGE
SDQDFEDTMNLIQAIDFDLSFSFIYSARPGTPAADVPDDVSEEVKKQRLHLLQQRISQQA
QRIARNMVGTTQRVLVEGPSKKNIMELSGRTENNRVVNFEGTPDMVGKFVDIEITDVFAN
SLRGNVVRTEEQMDLRIATAPESILETRQDKSDNLGVTQFQPN
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaatacgattcggaaaaaatggcggatttgctggatagcacccatgggtattcc
cttgcagaagaagcggaagacgcagatgtcattctgctcaacacctgttccattcgcgaa
aaggctcaagaaaaagtatttcatcaactgggtcgttggaagaacctgaagaaccacaaa
ccggatttggtgattggtgttgggggctgtgtagcctctcaagaaggcgatgccatacgt
cagcgggcgccctatgtagatattgtgtttggcccacaaacattgcatcgcttaccggag
atgatttctcaagtgcaggccggtgagcaagcggttgtagacatcagcttcccggaaatt
gaaaagtttgaccgccttccagaacctcgtgctgagggcccaactgcgtttgtgtctatc
atggaaggttgctctaagtattgtagcttctgtgttgttccctacacccgtggtgaagaa
gtgtctcgcccggtggacgatgtcatttttgaaattgctcaactggcagagcaaggcgta
cgtgaagttaatctattgggtcaaaacgtgaacgcctatcgcggtgaaaactacgacggt
agtatttgtcgattcgctgagttactgcatctggttgcagctattgatggcatagatcga
attcgctacaccacttctcatccggtggagttcactgacgatatcattgatgcttacgaa
accattccagaattggtggaccatttgcacttaccggtacaaagtggctcagaccacatc
ttggcaatgatgaagcgcggtcacactgctattgaatacaagtctaaaattcgacgtctg
aagaaagtccgtccgaatctgagcatgtcttcagacttcatcatcggttttcccggcgaa
agtgaccaggacttcgaagatacaatgaacctcatccaggccattgattttgacctgagc
ttcagctttatctacagcgccagaccgggcactcctgcggccgatgtacctgacgatgtc
agcgaagaagttaaaaaacaacgtttgcacctgttgcaacaacgtattagtcagcaagca
caacgcatagctcgcaatatggtgggtaccactcaacgggtgctggtagaaggcccctct
aaaaagaacatcatggaattgtctggccgtacggaaaacaatcgcgttgtaaacttcgaa
ggcacacccgatatggtaggcaaatttgtggatatcgaaatcaccgacgtattcgctaac
tctttacgaggcaatgtagtgcgcaccgaagagcaaatggatttgagaattgccacagcg
ccagagagcattcttgaaacgcgtcaggataaatccgacaaccttggcgttactcagttt
caacccaattaa
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