Planctobacterium marinum: MACH26_19540
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Entry
MACH26_19540 CDS
T09721
Name
(GenBank) TetR family transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
pmaw
Planctobacterium marinum
Brite
KEGG Orthology (KO) [BR:
pmaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaw03000
]
MACH26_19540
Transcription factors [BR:
pmaw03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
MACH26_19540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
TetR_C_13
TetR_C_24
HTH_IclR
TetR_C_5-like
AAA_8
Adenine_glyco
HTH_20
Motif
Other DBs
NCBI-ProteinID:
BDX06433
UniProt:
A0AA48HV41
LinkDB
All DBs
Position
2211581..2212228
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AA seq
215 aa
AA seq
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MLVQQNVKKNVKGSVRQANHGKIIKAAVTVFANKGYQGATVQEVAEQAGLPKANVLYYFK
SKQGIYEAVLSDILSLWNSSFDHATPEDEPAEALSRYIREKLEISRTNPEASKIFAMEMI
KGAEQLSDEIKAGMVSWFDARIAIIRQWIKQGKMADVDPTMLMFQIWATTQHYADFSAQI
TILKDGKALNKRGFQEVGDYLCQSILSSCGLTPEK
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
gtgctagtgcaacaaaacgtcaaaaagaacgttaaaggcagtgtccggcaagctaatcac
ggcaaaattataaaagctgcggtgacggtatttgccaataaaggctatcaaggtgctacc
gtacaagaggtggccgagcaggcgggattacccaaagccaacgtgctgtattactttaaa
tccaagcaaggtatttatgaggcggtattaagcgatattttgtccttgtggaattccagt
tttgatcacgctacgcctgaagacgagccggcagaagccttatctcgttatattcgagaa
aaactggaaatctctcgcactaatcctgaagcatcaaaaatctttgccatggagatgatc
aaaggggctgagcagctttctgatgaaataaaggcgggcatggtgtcctggtttgacgct
cgtatcgccattattcgtcagtggattaaacaaggtaaaatggcagatgtggatcctacc
atgctgatgttccagatttgggctaccacacagcattacgccgacttctctgctcagatc
accattttaaaagacggtaaagccctgaacaaaagaggttttcaggaagttggggactat
ctttgccagtccattttgagcagttgtggcttaacgccggaaaaataa
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