Planctobacterium marinum: MACH26_19840
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Entry
MACH26_19840 CDS
T09721
Name
(GenBank) DNA-binding protein
KO
K03746
DNA-binding protein H-NS
Organism
pmaw
Planctobacterium marinum
Brite
KEGG Orthology (KO) [BR:
pmaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmaw03036
]
MACH26_19840
03400 DNA repair and recombination proteins [BR:
pmaw03400
]
MACH26_19840
Chromosome and associated proteins [BR:
pmaw03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
MACH26_19840
DNA repair and recombination proteins [BR:
pmaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MACH26_19840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
Stathmin
DUF5713
Shikimate_DH
ADH_Fe_C
DUF2203
Allexi_40kDa
Motif
Other DBs
NCBI-ProteinID:
BDX06463
UniProt:
A0AA48HV61
LinkDB
All DBs
Position
complement(2237730..2238131)
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AA seq
133 aa
AA seq
DB search
MNEFLKTLTHGRKLQGAVKELSIQELEEIVVKLRNIIETRKQKESEKLAAEKEKLEKIAE
IQKQLQDAGITFEDLASNNVIAPSKRVGQKRPIKYSYTDGDGEVHNWTGIGRMPLVFSEQ
LKQGKNLEDFSVN
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaatttctaaaaacattaactcatggtcgaaaactgcaaggtgcagttaaagag
ttatcgattcaggaattagaagagattgtagtaaagctgagaaatataattgaaactcgg
aaacaaaaagagtcagagaaactcgcagccgaaaaagaaaagttagaaaagattgctgaa
atacaaaaacaattacaagacgcaggcatcactttcgaagatttggcgtcaaataatgtc
attgctccttccaaaagagtcggtcaaaaacgtccgataaaatattcctatacagatggc
gacggtgaagttcacaattggacagggataggaagaatgccacttgttttctctgaacag
ttgaaacaaggaaaaaacctggaagacttcagcgtcaactag
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