KEGG   Planctobacterium marinum: MACH26_19840
Entry
MACH26_19840      CDS       T09721                                 
Name
(GenBank) DNA-binding protein
  KO
K03746  DNA-binding protein H-NS
Organism
pmaw  Planctobacterium marinum
Brite
KEGG Orthology (KO) [BR:pmaw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pmaw03036]
    MACH26_19840
   03400 DNA repair and recombination proteins [BR:pmaw03400]
    MACH26_19840
Chromosome and associated proteins [BR:pmaw03036]
 Prokaryotic type
  Nucleoid associated proteins
   HNS (histone-like nucleoid structuring protein)
    MACH26_19840
DNA repair and recombination proteins [BR:pmaw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      MACH26_19840
SSDB
Motif
Pfam: Histone_HNS_N Histone_HNS Stathmin DUF5713 Shikimate_DH ADH_Fe_C DUF2203 Allexi_40kDa
Other DBs
NCBI-ProteinID: BDX06463
UniProt: A0AA48HV61
LinkDB
Position
complement(2237730..2238131)
AA seq 133 aa
MNEFLKTLTHGRKLQGAVKELSIQELEEIVVKLRNIIETRKQKESEKLAAEKEKLEKIAE
IQKQLQDAGITFEDLASNNVIAPSKRVGQKRPIKYSYTDGDGEVHNWTGIGRMPLVFSEQ
LKQGKNLEDFSVN
NT seq 402 nt   +upstreamnt  +downstreamnt
atgaacgaatttctaaaaacattaactcatggtcgaaaactgcaaggtgcagttaaagag
ttatcgattcaggaattagaagagattgtagtaaagctgagaaatataattgaaactcgg
aaacaaaaagagtcagagaaactcgcagccgaaaaagaaaagttagaaaagattgctgaa
atacaaaaacaattacaagacgcaggcatcactttcgaagatttggcgtcaaataatgtc
attgctccttccaaaagagtcggtcaaaaacgtccgataaaatattcctatacagatggc
gacggtgaagttcacaattggacagggataggaagaatgccacttgttttctctgaacag
ttgaaacaaggaaaaaacctggaagacttcagcgtcaactag

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