Planctobacterium marinum: MACH26_21810
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Entry
MACH26_21810 CDS
T09721
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pmaw
Planctobacterium marinum
Brite
KEGG Orthology (KO) [BR:
pmaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmaw03032
]
MACH26_21810 (ihfB)
03036 Chromosome and associated proteins [BR:
pmaw03036
]
MACH26_21810 (ihfB)
03400 DNA repair and recombination proteins [BR:
pmaw03400
]
MACH26_21810 (ihfB)
DNA replication proteins [BR:
pmaw03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MACH26_21810 (ihfB)
Chromosome and associated proteins [BR:
pmaw03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
MACH26_21810 (ihfB)
DNA repair and recombination proteins [BR:
pmaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
MACH26_21810 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Ten1
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
BDX06660
UniProt:
A0AA48I673
LinkDB
All DBs
Position
complement(2458859..2459149)
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AA seq
96 aa
AA seq
DB search
MTKSQLIERLADRARHIPSKEVEVAIKELLEQMAQTLQRGERIEIRGFGSFSLHFRAPRE
GRNPKTGETVKLEGKYVPHFKPGKELRERVNEAIAN
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcacaattaatcgaaagacttgccgacagagcaaggcatataccgtctaaa
gaggtggaagtagcaataaaagagctgctagagcaaatggctcagacacttcagcgagga
gagcgtatagaaatccgtggtttcggtagcttctctttgcatttcagagctccacgtgaa
gggcgaaatcccaaaactggagaaactgtcaagttagaaggtaagtacgtgccgcacttt
aagccagggaaagagttgcgcgagcgcgttaatgaagcgattgccaactaa
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