Planctobacterium marinum: MACH26_25860
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Entry
MACH26_25860 CDS
T09721
Symbol
rpoH_2
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pmaw
Planctobacterium marinum
Brite
KEGG Orthology (KO) [BR:
pmaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmaw03021
]
MACH26_25860 (rpoH_2)
Transcription machinery [BR:
pmaw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MACH26_25860 (rpoH_2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
HTH_31
YdaS_toxin
2Fe-2S_thioredx
HTH_25
Motif
Other DBs
NCBI-ProteinID:
BDX07065
UniProt:
A0AA48I6Y1
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All DBs
Position
2928373..2929263
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AA seq
296 aa
AA seq
DB search
MDITALTNESKQLSQVSSYQAFVNYARSIPMLDEAQEKELLTRFKVEDDLDAAKQLILSH
LRFVVHIANSYRGYGLPMEDIVQEGNVGLMKSVKRFDMSYDVRLASFAVYWIKSEIHDYV
LKNWRMVKVATTKATKKLFFGLRKFKSKLAWLTEDEVSNVAKELGVNESEVRMVETNLQL
SDVYFENTTGEQNQDEYDPSTITSALLSDASQAPEKVHGEQLAQKAQTAQLSAALKVLDE
RSRDIIESRWLHHEDAQLKLEDLAQRYGISAERVRQIETAAMAKIKKFLNSSTFTA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggacatcacagcattaacaaatgagtcaaaacaacttagccaggtcagcagttaccag
gcgtttgttaattatgcacgttcaattcctatgttagatgaagcgcaggaaaaagagttg
ttgacgcgtttcaaagttgaagacgacctcgatgcagcgaagcaacttattttgtcgcat
ttgcgtttcgtggtgcatattgctaacagttaccgcggctacggtttgccaatggaagac
atagtgcaagaaggtaatgtcggattgatgaaatcagtcaaacgcttcgatatgtcttat
gacgtgcgtctggcgtcttttgccgtttactggattaaatctgaaattcacgactatgtg
cttaaaaactggcgcatggtaaaagtggccaccaccaaggccactaaaaagctatttttt
ggtttacgcaaattcaaatccaaactggcgtggttaacggaagacgaagtaagtaacgtc
gccaaagagttaggagtgaatgagtccgaagtgcgcatggtggaaaccaacttgcaattg
agcgatgtatactttgagaataccacgggcgagcaaaaccaagatgagtacgatccatct
acgataaccagtgccctgctgtcagatgccagtcaggctccagaaaaagtacatggtgag
caactggcgcaaaaagctcagaccgcgcaattaagcgcggcgttaaaagtactggatgaa
cgcagtcgagatatcattgagtctcgctggttacatcacgaagatgcgcagctaaaactg
gaagatctggcacagcgttatggtatcagtgctgagcgagtccgacagattgaaactgcc
gctatggccaaaatcaaaaagtttttaaatagcagtaccttcacagcgtaa
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