Planctobacterium marinum: MACH26_28040
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Entry
MACH26_28040 CDS
T09721
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pmaw
Planctobacterium marinum
Pathway
pmaw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmaw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MACH26_28040 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaw03019
]
MACH26_28040 (pnp)
03016 Transfer RNA biogenesis [BR:
pmaw03016
]
MACH26_28040 (pnp)
Enzymes [BR:
pmaw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MACH26_28040 (pnp)
Messenger RNA biogenesis [BR:
pmaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MACH26_28040 (pnp)
Transfer RNA biogenesis [BR:
pmaw03016
]
Prokaryotic type
tRNA degradation factors
MACH26_28040 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
S1_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
BDX07283
UniProt:
A0AA48HI07
LinkDB
All DBs
Position
complement(3184197..3186329)
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AA seq
710 aa
AA seq
DB search
MTPITKTFQYGKHTVTLETGVIARQATAAVMASMDDTAVLVTVVGKKDAKPDQDFFPLTV
NYQEKTYAAGKIPGGFFKREGRPSENETLTARLIDRPIRPLFPDGFKNEVQVIVTVVSAN
PEIPTDIISLIGTSAALAISGIPFNGPLGAARVGYQDNQYVLNTLASEQENSQLDLVVAG
TSNAVLMVESEADILSEEVMLGAVMYGHQEMQAVINAVNEFAAEVNTPAWDWQPPAENTD
LKDKIKAAAGAEMEAAYQISDKLERKAAVDAATDKAATALLEADEELEEKEVRDLLHELE
SDVVRSRILAGEPRIDGRDPQMIRALDVSTGILPRTHGSALFTRGETQAIVAATLGTERD
AQMIDELSGVTNSRFMLHYNFPPYCVGETGMVGSPKRREIGHGRLAKRGIQAVMPSAEDF
PYVVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKASVAGIAMGLVKGDENFVVLSDI
LGDEDHLGDMDFKVAGTSNGITALQMDIKIEGITQEIMQIALKQAKEARLHILGVMDEAI
GGHRTEMSEFAPRIYTLKIDQDKIRDVIGKGGATIRQITEESECNIEIEDDGSIKIFATE
LAKAEKAIARIEAITADIEVGKVYNGKVTRIVDFGAFVEVLPGKEGLVHISQIAHERVNK
VADYLSEGQMVDVKVMEIDRQNRVRLSIKELIEKPQAEEAKPAAEESDAE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgactcctattacaaagaccttccaatatggaaaacatacagtaacactggaaacgggt
gttattgctcgtcaggccactgcggcagttatggctagcatggatgacacggcagtttta
gtaactgttgtaggtaaaaaagatgcgaaacctgatcaggattttttcccattaacagta
aactatcaggaaaaaacgtatgccgctggtaaaatcccaggtggctttttcaagcgtgag
ggaagaccttctgaaaacgaaacccttactgctcgcttaatcgaccgtcctattcgtcct
ctgttcccggacggttttaaaaacgaagtacaagttatcgttaccgtggtttctgcaaac
ccggaaatccctactgacatcatctcgttgatcggtacatctgctgcgctagccatttct
ggtatcccatttaatggcccactgggtgcggcgcgtgttggttatcaagacaatcaatat
gtattgaacacgctggcgtctgagcaagaaaacagccaacttgacctggttgttgctggt
acgtctaacgcagtactgatggtagaatctgaagctgacatcctctctgaagaagtgatg
cttggtgcggtaatgtatggtcaccaggagatgcaagctgtaatcaatgcggtaaacgaa
ttcgcagctgaagttaacacgcctgcatgggattggcagcctccggcagaaaataccgac
cttaaagacaaaatcaaagcggccgctggtgctgaaatggaagcggcttatcagatttct
gacaagcttgagcgtaaagcggcggttgatgcggcaactgacaaagcggctacagccttg
ttagaagctgatgaagaactggaagaaaaagaagttcgcgatttattgcacgaactggaa
agtgacgttgttcgctctcgcatccttgcaggtgagccgcgtatcgatggccgtgatcca
caaatgatccgtgctcttgacgtgtcaactggtatcttacctagaactcacggttcagct
ttgttcactcgtggtgaaacgcaggctatcgttgctgctaccttaggtactgagcgcgac
gcacaaatgattgatgagttgagtggtgttactaacagccgcttcatgttgcactataac
ttccctccttactgtgttggtgaaacaggtatggtgggttcgcctaagcgtcgtgagatt
ggtcacggtcgtcttgctaagcgtggtatccaggctgttatgccaagtgccgaagacttc
ccctatgtagtgcgcgttgtatcggaaattactgagtctaacggttcttcttctatggca
tctgtttgtggtacgtcattggcattgatggatgcgggtgtaccaattaaagcttctgta
gctggtattgccatgggtctggtaaaaggtgatgagaactttgttgttctgtctgacatc
ttgggtgatgaagatcacttgggcgacatggactttaaagtagcgggtacgtctaacggt
atcactgcattgcagatggatatcaagattgaaggtatcacgcaagaaattatgcagatc
gcgctaaagcaagctaaagaagccagattgcacatcttgggtgtaatggacgaggctatc
ggtggtcacagaactgaaatgtctgaatttgctccacgcatttatactctgaagattgac
caggacaagatccgcgatgttatcggtaaaggtggtgctactattcgccagatcaccgaa
gaatctgagtgtaatatcgaaatcgaagacgatggttctatcaagatcttcgccactgaa
ttggctaaagctgaaaaagctatcgctcgtattgaagcaattaccgctgacatcgaagta
ggtaaggtttacaacggtaaagtaacgcgcatcgttgactttggtgcttttgttgaggta
ttgccgggtaaagaaggtctggtacacatttcacaaatcgctcacgagagagtaaacaag
gttgctgattacctgagtgaaggtcagatggtagacgttaaggtcatggaaattgatcgc
cagaatcgcgttcgtttgagcatcaaagagctgattgaaaagccacaggctgaagaagcg
aagccagctgctgaagaatcagacgctgagtaa
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