Planctobacterium marinum: MACH26_28330
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Entry
MACH26_28330 CDS
T09721
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pmaw
Planctobacterium marinum
Pathway
pmaw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmaw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MACH26_28330 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmaw01007
]
MACH26_28330 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmaw03016
]
MACH26_28330 (aspS)
03029 Mitochondrial biogenesis [BR:
pmaw03029
]
MACH26_28330 (aspS)
Enzymes [BR:
pmaw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
MACH26_28330 (aspS)
Amino acid related enzymes [BR:
pmaw01007
]
Aminoacyl-tRNA synthetase
Class II (A)
MACH26_28330 (aspS)
Transfer RNA biogenesis [BR:
pmaw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
MACH26_28330 (aspS)
Prokaryotic type
Other AARSs
MACH26_28330 (aspS)
Mitochondrial biogenesis [BR:
pmaw03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
MACH26_28330 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BDX07312
UniProt:
A0AA48HPJ5
LinkDB
All DBs
Position
complement(3227588..3229351)
Genome browser
AA seq
587 aa
AA seq
DB search
MRTNYCGNIDASYVGQTVTLCGWVNRRRDLGGVIFLDLRDREGIVQVVYDPDLPELFDTA
NSLRQEFCVKIEGLVRARPEGQINKQMRTGEIEILGKGLEILSKADVLPLDFNQENSEEQ
RLRYRYLDLRRPEMSDKIKFRARVTSAVRNFLDENGFLDIETPILTKATPEGARDYLVPS
RTHKGQFFALPQSPQLFKQLLMMSGMDRYYQIVKCFRDEDLRADRQPEFTQIDIETTFMD
ADGVMAVTEEMVRGLFNDLLDVELGEFPKMSYAEAMQRYGSDKPDLRNPLEIVDVADLVK
DVDFKVFSGPANDPKGRVAVIRVPGGASLSRKNIDEYGKFVGIYGAKGLAWLKVNDKDAG
MDGLQSPILKFLSEEVATALLQRTGAETGDILLFGADSYTVVCEALGALRLKLGTDLDLL
QGEWRPLWVVDFPMFEEIDGQFHALHHPFTAPRNMTPEELAQAPGTALSDAYDMVLNGVE
LGGGSVRIHNQDMQQQVFSILGIDAEEAREKFGFLLDALKFGAPPHAGLAFGLDRMVMLM
TGSESIRDVMAFPKTTTAACPLTDAPGFANPQQLQELAIASIVKDSE
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaccaattattgcggaaatatagatgcaagttatgtaggtcagacagtgacattg
tgtggctgggtaaatcgtcgtcgtgatttggggggagttatcttccttgatttacgggat
cgagaaggaattgttcaggtggtttacgatccggatttgcctgagttatttgatacggca
aactccttgcgtcaggaattctgcgtaaaaatcgaagggcttgtgcgcgccagaccggaa
ggtcagatcaacaagcagatgcgcactggtgaaatcgagatcctgggtaaaggtctggaa
atattgagcaaagccgatgtgttgccattggacttcaatcaggaaaattctgaagaacag
cgtttgcgctatcgttaccttgatttacgtcgtcctgagatgtctgataaaatcaaattc
cgcgcccgcgttaccagcgcggtgcgcaatttcctggatgaaaacggcttcctggacatt
gaaacccccattctgaccaaggctactcctgaaggcgcccgtgactatctggtgcccagt
cgtacgcacaaaggtcaatttttcgcattgccacagtctcctcagctgttcaaacagctg
ctgatgatgtcgggcatggatcgctattaccaaatcgtaaagtgtttccgtgacgaagat
ttacgcgccgacagacagccagagtttacccaaattgatatcgaaaccaccttcatggac
gctgatggtgtgatggccgttactgaagagatggtgcgtggtttgttcaatgatttattg
gacgtggaactgggcgagtttccaaaaatgtcttatgccgaggcaatgcagcgttacggc
agtgataagccagatttacgcaacccactagaaatcgtcgacgttgctgatctggttaaa
gacgtcgattttaaagtgtttagtggcccggctaacgatcccaaagggcgcgttgcggtt
atccgcgtaccaggtggtgccagcctgtcgcgtaaaaacattgatgaatatggcaagttt
gtcggcatctatggtgccaagggcctggcctggttgaaggtaaatgacaaagacgccgga
atggacggcttgcaatctccgattctgaaatttttatctgaagaggtcgctacagcgctg
ttgcaaagaacgggcgctgaaaccggcgatattctgttatttggtgctgattcctacaca
gtagtgtgtgaggctttgggggcactgcggttaaaactgggcacggatctggatttattg
caaggtgaatggcgtcctttatgggttgtggatttccctatgttcgaagaaatcgacggc
caattccacgctttgcatcacccatttactgcgccacgcaatatgacaccagaagagctg
gctcaggcacctggaacagcgctttctgatgcctatgacatggttttaaatggcgttgaa
ttaggtggtggctcggtgcgtatccacaatcaggatatgcagcagcaggtgttttctatt
ttgggtattgatgccgaagaagcccgtgagaagtttggcttcttattggatgcactgaag
tttggtgcgccaccgcacgcaggattggcgttcggcttagatcgcatggtgatgttgatg
accggctctgagtctattcgcgacgtgatggcattcccgaaaaccaccacggctgcctgt
cctctgacagatgctcccggatttgccaatccgcaacaactgcaggaattggctattgct
tccatcgtcaaggacagcgaataa
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