Planctobacterium marinum: MACH26_29430
Help
Entry
MACH26_29430 CDS
T09721
Name
(GenBank) hypothetical protein
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
pmaw
Planctobacterium marinum
Pathway
pmaw00500
Starch and sucrose metabolism
pmaw01100
Metabolic pathways
pmaw01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pmaw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
MACH26_29430
Enzymes [BR:
pmaw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
MACH26_29430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase_C
Alpha-amylase
Nup35_RRM_2
Motif
Other DBs
NCBI-ProteinID:
BDX07422
UniProt:
A0AA48HRK8
LinkDB
All DBs
Position
complement(3353577..3355574)
Genome browser
AA seq
665 aa
AA seq
DB search
MKSLKSTLALGVAATLLSAPAVSAPTTFVHLFEWNWSDVANECETFLGPNGYAAVQVSPP
NEHIQGDQWWTRYQPVSYQIQSRGGSEAEFVDMISRCNAQGVEIYVDAVINHMAAGSGTG
VAGNSYGNKQYSVYGPQDFHDTCTINPEDYGNDRWRVQNCELVGLPDLNTSATYVQDTLA
GYLNYLTNLGVAGFRFDASKHMSVSDIQGVLSKVNGSPLVFQEVIDQGGEAVSAAEYTGT
GLVTEFKYSTQLGNTFRNGQLSWLSSFGEAWGFLPSYQAVVFVDNHDNQRGHGGAGNVIT
FEDGRLYDLANVFMLAWPYGYPKVMSSYDFHGDTDAGGPSVPVHNNGTLECYGSNWKCEH
RWSYIAGGVDFRNNVNDNWNVTDWWDNGNNQIAFGRGSAGHVAINKEDYTMNVALGTQMT
AGVYCNVLKGELSQDGSSCSGETITVNGDGSINTNLAAWDAFAIHQNSKITTTGGNEDWQ
RTVIFIQAETASGQDMFIRGGIDHDYANNNLGRNCQTTNFECAMPITHNNLRNVTTAPWK
SNEFYLDWYGAESAQDSYAEGTAMDWTTDVWPSSWGAVKTVAVDGYGEEPLNLWGQHYWM
LDVQMDCSKAVNGWFEVKAFVKNGQGWESDITQSGAPYSSNNHFAQCGKINKFDFNGNSA
EISDF
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcccttaaatcgacgctggcgctcggcgttgccgcaactctactgagtgctcct
gcagtctctgctcctacaacctttgtgcacctttttgaatggaattggtcagacgtggcc
aatgagtgtgaaacgtttctcggtccaaatggctatgccgcagtgcaagtgtcaccgccg
aatgagcacattcagggggatcagtggtggactcgctaccaacctgtcagctatcagatc
caaagccggggcggcagcgaagctgaatttgttgacatgatatcccgttgtaacgcccaa
ggcgtggagatttatgtggatgccgtgattaaccacatggctgcgggtagtggcactggc
gtggctggcaatagctacggcaataaacaatattcggtttatggcccgcaagattttcac
gatacttgcaccattaatccggaggattatggtaatgatcgctggcgagtacagaactgt
gagctggtgggattaccggatttaaataccagtgccacttatgtacaagatacgttggcg
ggttatctcaattatttgactaatctcggagttgctggttttcgatttgatgcttcaaaa
cacatgtcggtcagtgatattcagggggtattgtccaaagttaacggttcacctttggtc
tttcaggaagtcatcgatcaaggtggtgaagcggtaagcgcagcagaatatacgggaacc
gggttggtaaccgagtttaaatatagtactcaattaggtaataccttccgcaatggtcaa
ttatcctggttaagcagttttggcgaggcgtggggttttttacccagctatcaagcggtg
gtatttgtggataaccacgataatcaacgtggccatggtggtgctggtaatgtcattacg
ttcgaagatggtcgactttatgatctggcaaacgtcttcatgctggcctggccttatggt
tatcccaaggtgatgtccagctatgatttccacggtgatactgatgcaggtgggccatcc
gtgccggtgcataacaatggcactttggaatgttatggcagcaactggaaatgtgaacat
cgctggagctatatcgctggtggtgtagatttcagaaacaacgtgaatgacaactggaac
gtgactgattggtgggacaacggcaataatcaaatcgccttcggtcgcggcagtgcaggg
catgttgctatcaacaaagaagactacaccatgaatgttgctcttggtactcagatgacg
gcgggtgtgtactgtaatgtgctcaaaggtgagttgtctcaagatggcagtagttgttct
ggtgagactattaccgtcaatggtgacggtagcataaacactaatcttgccgcctgggat
gcgttcgccattcaccaaaacagcaaaattactacaaccggaggtaatgaagactggcag
cgcaccgtgattttcattcaggcagaaacggctagcggtcaggatatgtttattcgaggc
ggaattgatcacgattacgccaacaacaatctggggcgaaattgccagaccactaatttc
gaatgtgccatgcccattacccacaataatttgcgcaacgtcacaacggccccctggaag
tcaaacgagttttaccttgactggtatggcgcagagtcggcacaggatagctatgctgag
ggaaccgccatggattggactacggatgtttggccttcctcatggggggcagtaaaaacg
gttgctgtagatggttacggcgaagagccgctcaatctttgggggcagcactattggatg
ttagatgtgcaaatggactgcagcaaagcggtaaatggttggtttgaagtcaaagccttt
gttaaaaacgggcagggctgggaaagcgacattacacaaagtggtgcgccctacagcagt
aacaatcactttgcccaatgcggtaaaattaacaagttcgactttaatggcaatagcgcg
gagatttcagatttttaa
DBGET
integrated database retrieval system
