Planctobacterium marinum: MACH26_30780
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Entry
MACH26_30780 CDS
T09721
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pmaw
Planctobacterium marinum
Brite
KEGG Orthology (KO) [BR:
pmaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmaw03400
]
MACH26_30780 (radA)
DNA repair and recombination proteins [BR:
pmaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MACH26_30780 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
DnaB_C
Lon_C
DUF7125
RecA_N
AAA_14
nSTAND_NTPase5
GvpD_P-loop
SLFN-g3_helicase
AAA_22
ABC_tran
Viral_helicase1
Zeta_toxin
NTPase_1
AAA_16
AAA
nSTAND3
Rad51
AAA_24
cobW
AAA_5
AAA_29
NPHP3_N
AAA_19
DUF6549
KdpD
PAXNEB
ATPase_2
DAP3
Motif
Other DBs
NCBI-ProteinID:
BDX07557
UniProt:
A0AA48HRU6
LinkDB
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Position
complement(3494748..3495995)
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AA seq
415 aa
AA seq
DB search
MRIPASGNSSKSGFSGLTQAKVETLSEIDLQTVPRFSSGFVELDRVLGGGIVPGSAILIG
GSPGAGKSTLLLQTICHLSKSQNVLYVTGEESLQQVAMRAQRLGLPSDKVKVLAETEVET
ICKLALSEKPGVMVIDSIQVMHMGDIQSAPGSVSQVRECAAFLTRFAKQNNVAMFIVGHV
TKEGSIAGPKVLEHCIDCSLMLDGDADGRYRTLRGHKNRFGAVNELGVFGMTESGLKEVK
NPSAIFLNRSEEASPGSAVMVVWEGTRPLLVEIQGLVDYSQMANPRRVAVGLEQNRLTML
LAVLHRHGDVQMNDQDVFVNVVGGIRVSETSADLALLVALLSSFRNKTLPRDLIVFGEVG
LSGEIRPVNNGSERISEAKKHGFTRAIVPKANVPKNPQGITVVGVKNLQEALEAI
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatacccgcttctggtaactcctcaaagagcgggttttcaggtttaactcaagcc
aaggtcgagaccctgtcagaaattgatttgcaaacggtacctagattcagttctggcttt
gtcgaactggatcgcgttttgggcggcggcatcgtgcccggttcggcaattttaatcggc
ggctcccccggcgcgggaaagagtaccctgttgttacaaactatttgtcacctttcaaaa
agccagaatgtactctatgtcaccggtgaggaatccctgcagcaggtggcaatgcgagcg
cagcgtttgggcttacccagcgacaaggtcaaagtgctggcagaaaccgaggtagaaacc
atatgtaaactggctttaagtgaaaagcccggtgtcatggtcatcgactcgattcaggtg
atgcatatgggggacattcaatctgccccaggcagtgtttctcaagtgcgtgagtgtgcc
gcttttctaactcgctttgctaaacaaaacaatgtggcgatgtttattgtcggccatgtc
accaaagaaggctctatcgccggacctaaggttctggagcattgcatagattgctcgtta
atgctggacggtgatgccgacggcagatatcgcactttgcgaggtcacaaaaatcgcttt
ggcgcggttaatgagttgggggtttttggcatgaccgagtcaggcctaaaagaagttaaa
aatccctccgccatctttctcaatcgcagtgaagaagcctctcccggcagtgcggttatg
gtggtgtgggaaggaaccagaccgttattggtagagattcaaggccttgtggattacagc
cagatggccaatccaagacgcgtcgctgtgggattagagcaaaaccgtttgactatgttg
ttagcggtactgcatcgccatggtgacgtacaaatgaatgatcaagacgtttttgttaac
gtggttggaggaattcgtgtctcggaaaccagtgccgatttggcattattggtggcgtta
ttgtctagtttccgcaataaaaccttgcccagagatttaattgtattcggcgaagtgggt
ttatccggcgaaatccgtccggtgaacaatggcagtgagcgcatatcagaggcaaaaaaa
cacggcttcacccgtgctattgtgcctaaggcgaatgtacccaaaaatccgcaagggatt
acggtggtgggggtgaagaaccttcaggaagcattggaggcgatttga
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