Planctobacterium marinum: MACH26_31000
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Entry
MACH26_31000 CDS
T09721
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pmaw
Planctobacterium marinum
Pathway
pmaw03030
DNA replication
pmaw03430
Mismatch repair
pmaw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmaw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MACH26_31000 (dnaE)
03430 Mismatch repair
MACH26_31000 (dnaE)
03440 Homologous recombination
MACH26_31000 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmaw03032
]
MACH26_31000 (dnaE)
03400 DNA repair and recombination proteins [BR:
pmaw03400
]
MACH26_31000 (dnaE)
Enzymes [BR:
pmaw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MACH26_31000 (dnaE)
DNA replication proteins [BR:
pmaw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MACH26_31000 (dnaE)
DNA repair and recombination proteins [BR:
pmaw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MACH26_31000 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HROB
Stn1
Motif
Other DBs
NCBI-ProteinID:
BDX07579
UniProt:
A0AA48KTI4
LinkDB
All DBs
Position
complement(3542561..3546037)
Genome browser
AA seq
1158 aa
AA seq
DB search
MTQENSAAFVHLRVHSDFSMCDGLNKVPKIISRVAELNMPAVAITDQMNMCGLVKYYYQA
HGNGIKPIIGCDFWLQNPLIGEDIFRTTLLASNNAGYKNITLLISRAYQRGAVQGKAVID
AHWLAEHAEGIIVLSGAKDGELGFALQKDNQKQINQLLDFYLQHFPESFFIELQRTGRPG
EEDYLHAAVALAAERELPVVATNEVVFLKESEFDAHDIRVSIHDGYTLDDPRRPKRFSEQ
QYLRTSEEMQELFSDIPEAIENTIEIAKRCNVTVQLGTYFLPKFPTGGLSDADYLVKVSQ
EGLEERLEFLFPNPDVRVEKRPEYDERLEIELQVINQMGFPGYFLIVMEFIQWSKDHNIP
VGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDH
VADMYGRDAVSQIITFGTMAAKAVVRDVGRVLGHPYGFVDRISKLIPGDPGMTLAKAFDV
EPRLQEAYDEDEEVKDLIDMCRILEGVVRNAGKHAGGVVISPTKITDFAPLYCDEEGKFP
VTQFDKNDVETAGLVKFDFLGLRTLTIIQWALDMVKERSGDEVDISAIPLDDKESFAMLM
RAETTAVFQLESRGMKDLINRLQPDTFEDIIALVALFRPGPLQSGMVDNFIDRKHGREEI
SYPDAQYQHECLQEILEPTYGIILYQEQVMQIAQEMSGYSLGGADLLRRAMGKKKPEEMA
KQRASFEDGAKNNGIDPELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPSE
FMAAVMSADMDNTDKIVTLVDECNRMGIKISPPDVNSGKYKFTVNQEGTIIYGIGAVKGV
GEGPIEAIIKAREEQGYFTDIFDFCAKVDLKKINKRVMEKLILSGALDELGPHRASLMAT
LPEAMAAAEQHAKAESYGQADMFGLLTSEPEEVNNAFVNVPEWPEKQWLDGEKETLGLYL
TGHPINQYRAELQHYCKGRLVDAKPGDRDSVAKVVGLVIGVRVMVNKKGRRWAIVTLDDQ
SARMDARFFPDMFEEYEEMLQTDKVLVLSGQVSFDDFSGGNTITVRHAQDIIQAREKQLK
HLMLEVDAPWCDEAGIAKLQQVMTPFKGGICPVQLKYNHEDAQACISLGAEWYLSPQDEL
LYEVKNLLGAEKVEMVFH
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgactcaggaaaactctgccgcttttgttcacctgcgagtacatagtgacttttctatg
tgcgatggtttgaataaggtacccaaaatcatttcgcgtgttgcagagctcaatatgcct
gcagtggcaattactgaccagatgaatatgtgtggcttggtaaaatactattatcaggcc
catggtaacggtattaagcctattatcggttgtgatttctggctacagaatccccttatc
ggtgaagacattttcagaactactctgttagccagcaacaatgccggttataaaaatatt
actctgttaatctctcgtgcctatcagagaggggctgtgcaaggcaaagcggtcattgat
gctcactggttggcagaacacgctgagggaattatcgtcctgtctggagccaaagatggc
gagcttggttttgctctgcaaaaggataatcaaaagcaaattaaccagttattagatttc
tatttacagcattttcccgaaagcttttttattgaattacaacgcactggcaggcccggc
gaagaagattatttacacgcggcagtggcgcttgctgcagagcgagagctgccagtggtt
gccactaacgaagttgtctttcttaaagaatctgagtttgatgctcatgatattcgggtc
agtatccacgatggctacacacttgacgacccgcgtcgtccgaaacgcttcagtgagcag
caatacctgcgcacttcggaggaaatgcaggaactgtttagcgatattcccgaagcgata
gaaaataccattgagattgcaaaacgctgtaatgtcaccgtgcaattaggtacctatttc
ttgcctaagtttccaaccgggggactttcggatgccgattatctggttaaggtctcgcaa
gagggcctggaagaacgcctggagtttcttttccctaatcccgacgtccgtgttgaaaaa
cgaccagaatacgatgaacgtctcgagatagaactacaagttatcaatcagatgggcttc
cccggctacttcctcatcgtgatggagtttattcagtggagtaaagatcacaatataccg
gtggggccgggacgtggttcgggggccggttctttggtggcctatgcactaaagattact
gatctggacccattggaattcgatttgctatttgagcgattcttaaatccagagcgggtt
tccatgccggatttcgatgttgatttttgtatggaccgtcgagacgaggtaatcgaccac
gtggctgacatgtacggtcgcgacgcggtatcgcaaattattacctttggaaccatggct
gctaaagcagtagtgcgagacgtcggtcgagtattaggtcatccctatggctttgtagat
cgcatctcgaaattgatcccaggtgatcctggtatgacgcttgccaaagcttttgacgtg
gagccgcgtttacaggaagcttacgacgaagatgaggaagtgaaagacctcattgatatg
tgccgcatcctggaaggggtcgtgcgcaatgccggtaaacacgccggaggcgtggtaatt
tctccaaccaagatcactgattttgctccgctatattgcgatgaagagggcaaatttccc
gttactcagttcgataaaaatgatgtagagacagcagggctggttaagtttgactttctc
gggttacgtacattaaccataattcagtgggcgctggatatggtgaaagagcgctcgggt
gatgaggtggacatttccgcaataccgctagatgacaaagaaagttttgccatgttgatg
cgtgccgagaccacggcggtattccagctggaatctcgaggcatgaaagacctcattaat
cgtcttcagcctgatacttttgaagatatcattgcattggtggctttattccgtccgggg
ccattacaatcgggcatggtagataacttcattgaccgcaagcacggcagggaagagatc
tcctaccctgatgcgcaatatcaacacgagtgtctgcaagaaatattagagcccacctat
ggcattatcctgtaccaggaacaggtaatgcagattgctcaggagatgtctggttatagc
cttggtggcgctgacttgttacgtcgagccatgggtaagaaaaagccggaagaaatggcc
aagcaaagggcctcatttgaagatggtgccaagaataacggtattgatcctgagctggcc
atgaaaatcttcgatctggtggaaaagttcgcaggttatggttttaacaaatctcactcg
gctgcttatgcgctggtttcctatcaaactctgtggctgaaggcccattatccttccgag
tttatggcagcagtaatgtcggccgatatggataacaccgataaaattgtgaccttggtg
gatgagtgtaaccgtatgggcattaaaatctctccaccagatgttaactcgggcaagtac
aagtttacggtaaatcaggaaggcaccattatttatggtatcggtgcggtaaaaggtgtg
ggtgaaggccctattgaagccatcattaaggcgcgagaagaacaaggctactttactgat
atttttgatttttgcgccaaggttgacctgaagaagattaacaagcgggtgatggagaaa
cttatcctgtcgggagctttggacgagttaggtccgcatcgcgcctcgttgatggctacc
ttaccagaagctatggcagccgctgaacagcatgccaaagccgagtcttatggacaagct
gatatgttcggtttgttgaccagtgaaccagaagaggttaataacgcctttgttaatgtt
cccgagtggccggaaaaacaatggttggatggtgaaaaagaaaccttgggtctatatctt
acaggtcaccccatcaatcagtatcgggcagagttacagcactattgtaaaggccgtttg
gtggatgctaaacccggtgaccgagactcagtagcaaaagtggttgggctggtgattggg
gttcgtgttatggttaataaaaagggccggcgttgggccattgtaacccttgatgatcag
agtgctcgaatggatgcgcgtttcttccccgatatgtttgaagaatacgaagaaatgctg
caaaccgataaagttttggtactttccggacaggtcagctttgatgatttctccgggggc
aatacaatcacggtccgtcatgctcaagatattattcaggcgcgcgaaaaacagctaaaa
cacctgatgttggaagtcgacgccccgtggtgcgatgaagccggcattgccaaattgcaa
caggtaatgacgccgtttaagggggggatttgcccggtgcaacttaagtataatcatgaa
gatgcacaggcctgtatatctttaggagcagaatggtacttatcgccgcaagatgagtta
ctatacgaagtaaagaatctgctgggtgcagagaaagtcgaaatggtttttcattaa
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