Planctobacterium marinum: MACH26_36350
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Entry
MACH26_36350 CDS
T09721
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pmaw
Planctobacterium marinum
Brite
KEGG Orthology (KO) [BR:
pmaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaw03019
]
MACH26_36350
03009 Ribosome biogenesis [BR:
pmaw03009
]
MACH26_36350
Messenger RNA biogenesis [BR:
pmaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MACH26_36350
Ribosome biogenesis [BR:
pmaw03009
]
Prokaryotic type
rRNA processing factors
MACH26_36350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
BDX08114
UniProt:
A0AA48HUB1
LinkDB
All DBs
Position
complement(4191283..4192761)
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AA seq
492 aa
AA seq
DB search
MSGELLINVTPSESRVALIENGLLQEIHVERHTKKGLVGNIYRGKVSRVLPGMQAAFVDI
GLEKAAFLHASDIVVHNEILEEVNESEIKKTHNQTQDIRELVRDGQDIVVQVVKDPIGTK
GARLTTDITIPSRYLVFMPGVTHLGVSQRIEDEQERERLKSMMETVGGKGGFILRTAAEG
VGEKELIADAEFLQRLWSKIQTRQKKRKSNVLYEDLPLARRVLRDFVGTELDRIRIDAKL
AFNELQHFTKEYAPEFNRLLEYYPGERPIFDLYDVENEAQRALERRVDLKSGGYLIIDQT
EAMTTIDINTGAFVGHRNLEETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMTDVSHQ
KRVLHSLEVAVSKDRAKSKIHGFTALGLVEMTRKRTRESLEHILCGECPVCKGRGSIKTV
ETICFEIMREIVRVNRAYDADKFVVYASPAVAEALMDQESHVLAELEVFISKQIKVQTEM
LYNQDKYDVVMM
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtgaattattaattaatgtaacaccatcagagtccagagtggctttgatcgaa
aatggcttgctgcaggaaattcatgttgagcgccacaccaaaaaagggctggtgggtaac
atttatcgcggtaaagtcagtcgtgttttacccggtatgcaagccgcctttgtagacatt
ggccttgaaaaagcagcctttttgcatgcttccgatatagtcgtgcataacgaaatattg
gaagaagtgaacgaatcagaaattaaaaagacccacaatcaaactcaggacatccgcgag
ctggtgcgtgatggccaggatattgtggtgcaggtagtcaaagatcccattggcaccaaa
ggtgctcgcctcacaacggacatcaccatcccatcccgctatctggtatttatgccaggt
gtaacacatctgggcgtatcacagcggatcgaagatgagcaagagcgggagcgcctgaaa
tccatgatggaaacggttggcggcaaaggtggatttattctgcgcaccgccgcagaaggc
gttggtgaaaaagaacttatcgctgatgcggaatttttacaaagattgtggtctaaaata
caaacaagacaaaaaaagcgaaagtctaacgttttgtacgaagatttgccgttggcgcgt
cgtgttttgcgagactttgtgggcacagagctggatcgcatcagaatcgacgccaaactg
gcttttaatgaattacaacattttaccaaagagtacgcgccggagtttaaccgcctgttg
gaatattacccgggtgaacggccgatatttgatttatacgatgtagaaaacgaagcgcag
cgggctctggaaagacgtgttgatttgaaatccggcggctatttgatcattgatcaaacc
gaggccatgactacgattgatatcaatactggcgcatttgtgggccatcgcaatttggaa
gagacgattttcaataccaacatcgaggccacccaggcgatagcgcgacagttacgcttg
cgaaatttaggtggcattatcattatcgattttatcgacatgaccgatgttagccatcaa
aaacgggtattacacagtcttgaagtggcggtgagtaaagaccgggcaaagagtaaaatt
catggttttactgctcttggcttggtggaaatgacccgcaagcgcacgcgtgagagtctg
gagcacatcttgtgtggtgaatgcccggtgtgcaaagggcggggttctattaaaaccgtg
gagactatctgctttgagattatgcgggagattgtgcgggttaatcgcgcttatgatgcc
gacaagtttgtagtttatgcatcacccgctgtcgctgaagcgttgatggaccaagagtcg
cacgttttggcggaattggaagttttcatcagtaaacaaattaaagtacaaacggagatg
ttgtataaccaggataaatatgacgtggttatgatgtga
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