Planctobacterium marinum: MACH26_36610
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Entry
MACH26_36610 CDS
T09721
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
pmaw
Planctobacterium marinum
Pathway
pmaw03030
DNA replication
pmaw03430
Mismatch repair
pmaw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmaw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MACH26_36610 (ssb)
03430 Mismatch repair
MACH26_36610 (ssb)
03440 Homologous recombination
MACH26_36610 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmaw03032
]
MACH26_36610 (ssb)
03400 DNA repair and recombination proteins [BR:
pmaw03400
]
MACH26_36610 (ssb)
03029 Mitochondrial biogenesis [BR:
pmaw03029
]
MACH26_36610 (ssb)
DNA replication proteins [BR:
pmaw03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MACH26_36610 (ssb)
DNA repair and recombination proteins [BR:
pmaw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
MACH26_36610 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
MACH26_36610 (ssb)
Mitochondrial biogenesis [BR:
pmaw03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
MACH26_36610 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
tRNA_anti-codon
Lyase_8_N
DUF3127
Motif
Other DBs
NCBI-ProteinID:
BDX08140
UniProt:
A0AA48I0S3
LinkDB
All DBs
Position
complement(4221925..4222494)
Genome browser
AA seq
189 aa
AA seq
DB search
MASRGINKVIIVGNLGQNPEVKYMPNGNAVTNISVATSESWKDQQGQLQERTEWHRIVMF
RKLAEIAGQYLTKGSQVYIEGKLQTRKWQDQNGQDRYTTEIVADNMQMLGGRQGGGNEGG
GYQPNQGMQGGGAPQQAPSYQQMPNQGGGQPNRGGHQGGGNQGGFNQAPKQPSQPMQEPD
FDFDDDIPF
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggccagcagaggtattaacaaggttattatcgtaggtaacttggggcaaaaccctgag
gtgaaatacatgccaaacggtaatgccgttacaaacatcagcgtagccaccagtgaaagc
tggaaagatcagcaaggccaattgcaagagcgcaccgaatggcaccgtatcgttatgttc
cgtaaactggctgagattgcaggacaatacctgactaaaggttcgcaagtttatatcgaa
ggtaaactgcaaacccgcaagtggcaggaccaaaatggccaagaccgttacaccacggaa
atcgttgctgacaacatgcaaatgttaggtggtcgccaggggggaggtaacgaaggcggt
ggttatcagccgaatcaaggtatgcaaggtggtggtgcgccgcagcaagcgccaagctat
cagcaaatgcccaatcaaggcggcggtcaaccgaatcgcggtggtcatcagggaggcggt
aatcaaggtggtttcaatcaagcgccgaaacaaccttcgcagcctatgcaagagccagat
ttcgactttgacgacgatattccgttctaa
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integrated database retrieval system
