Planctobacterium marinum: MACH26_38170
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Entry
MACH26_38170 CDS
T09721
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pmaw
Planctobacterium marinum
Pathway
pmaw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmaw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MACH26_38170 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaw03019
]
MACH26_38170 (groL)
03110 Chaperones and folding catalysts [BR:
pmaw03110
]
MACH26_38170 (groL)
03029 Mitochondrial biogenesis [BR:
pmaw03029
]
MACH26_38170 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmaw04147
]
MACH26_38170 (groL)
Enzymes [BR:
pmaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MACH26_38170 (groL)
Messenger RNA biogenesis [BR:
pmaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MACH26_38170 (groL)
Chaperones and folding catalysts [BR:
pmaw03110
]
Heat shock proteins
HSP60 / Chaperonin
MACH26_38170 (groL)
Mitochondrial biogenesis [BR:
pmaw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MACH26_38170 (groL)
Exosome [BR:
pmaw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MACH26_38170 (groL)
Exosomal proteins of other body fluids (saliva and urine)
MACH26_38170 (groL)
Exosomal proteins of breast cancer cells
MACH26_38170 (groL)
Exosomal proteins of colorectal cancer cells
MACH26_38170 (groL)
Exosomal proteins of bladder cancer cells
MACH26_38170 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
BDX08296
UniProt:
A0AA48KQZ4
LinkDB
All DBs
Position
4397017..4398663
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVRFSDDARAKMLAGVNVLANAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQSIVTEGLKSVAAGMNPMDLKRGI
DKAVAAAVEELKALSTECKDSKSIAQVGTISANSDEEVGNIIAEAMDRVGQEGVITVEEG
QALQNELDVVEGMQFDRGYLSPYFINNQDNGTVELDNPFILLVDKKVSSIRELLPVLEAV
AKASKPLLVIAEDLEGEALATMVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGLELEKATLEDLGTAKRIVINKDNTTVVDGAGDEEAIKGRCAQIRGQIEESTSDY
DKEKLQERLAKLSGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RVAAKLAGLTGDNEDQTHGVNLALRAMEAPLRQISTNAGAEASVVTNEVKNNEGNYGYNA
GNDTYGDMIEMGILDPTKVTRSALQFAASIASLMITTECMVTDAPKDDAPAAPDMGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtacgcttctcagatgacgctcgcgcaaaaatgttggcgggtgtt
aacgttttagcaaatgcagtaaaagtaacattaggtcctaaaggccgtaacgtagtttta
gacaagtctttcggcgctcctaccatcactaaagacggtgtatcagtagccaaagaaatc
gaactggaagacaagttcgaaaacatgggcgcacagatggttaaagaagttgcgtctaaa
gcgaacgacgaagctggtgacggtacaactactgcaactgtgttagcccagtctatcgta
actgaaggtctgaagtctgttgctgcgggtatgaacccaatggaccttaagcgcggtatc
gataaagccgttgcggcagctgttgaagagttaaaagcactgtctactgaatgtaaagac
agcaagtcgattgctcaggtaggtactatctctgcaaactctgacgaagaagtgggtaac
atcattgcagaagcaatggaccgcgtaggtcaagaaggtgttatcactgttgaagaaggt
caggctctgcaaaacgaattagacgttgttgaaggtatgcagtttgaccgcggttacctg
tctccttacttcatcaacaaccaggacaatggcactgttgaactagacaaccctttcatc
cttttggttgacaagaaagtatcaagcatccgtgaattgttgccagtattagaagctgtt
gcaaaagcgtctaagcctctgttggttatcgctgaagacttagaaggcgaagcactggct
actatggtagttaacaacatgcgcggtatcgttaaagttgctgcagttaaagcacctggt
ttcggtgatcgtcgtaaagctatgttgcaagacatcgcgacactaactggcggtactgtg
atctctgaagaaatcggtcttgagttagaaaaagccactttagaagatttgggtacagct
aagcgtatcgttatcaacaaagacaacaccactgttgttgacggtgctggcgacgaagaa
gcgattaaaggtcgttgcgcgcaaatccgtggtcaaatcgaagaatcgacttctgactac
gacaaagagaagctgcaagagcgtctggctaaattgtctggcggtgttgccgttatcaaa
gttggcgcggctactgaagttgaaatgaaagagaaaaaagcacgcgtagaagatgcactg
cacgcaactcgcgcagcggtagaagaaggtgtagtacctggtggtggtgttgctctggtt
cgcgttgcagcaaaattagctggccttactggggacaacgaagaccaaactcacggtgtt
aaccttgcactacgtgcgatggaggcgcctctgcgtcaaatctctactaacgctggtgca
gaagcctctgttgtaactaacgaagttaagaacaacgaaggtaactacggttacaacgcc
ggtaacgacacttacggtgatatgatcgaaatgggtatccttgacccaactaaagtaacg
cgttcagctctgcaattcgcagcgtcaatcgcaagcttaatgatcaccactgagtgcatg
gttactgatgcacctaaagatgatgcacctgcggctccagatatgggcggcatgggcggc
atgggtggcatgggcggcatgatgtaa
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