KEGG   Planctobacterium marinum: MACH26_40550
Entry
MACH26_40550      CDS       T09721                                 
Name
(GenBank) MBL fold hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
pmaw  Planctobacterium marinum
Pathway
pmaw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pmaw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MACH26_40550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmaw03019]
    MACH26_40550
Messenger RNA biogenesis [BR:pmaw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MACH26_40550
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 ZrgA ssDNA-exonuc_C
Other DBs
NCBI-ProteinID: BDX08534
UniProt: A0AA48HV42
LinkDB
Position
4679716..4681038
AA seq 440 aa
MWFLPLGGTGEIGMNLNLYGHDGAWLMVDCGITFDAKIDDQQAHKFDIVAADPSFISKRK
EQLCGIVISHAHEDHIGALARLWRRFKADVYTTPFTAEILRRKFQREGEKRPPVIHEVTE
YEIHHIGPFEVQWHPMNHSLPEPFGLSLKTQAGSVFHSADWKLDNKPVLGKPLNPNALKR
LTRYNFLATVCDSTNALKPGYSLSEHDCYEGLKAHIAQAQGRVAVACFSTNIARLISLAR
IANETGRYFALLGRALENTVAVARLTGHWPEDLTIQDPNTVGYLPPDEVLVAVTGSQGEE
RAVLNRMADGYYRQIDLDKGDTVIFSSVIIPDNELKIERLVNKLKAHNIAVVQAETSNIP
VHASGHPNEEELRHFYKALQPQIAIPTHGEAAHMERNAQIAKECHVPTQLTGFNGDLFKI
APEAQVIKGFAPVGRIPLAE
NT seq 1323 nt   +upstreamnt  +downstreamnt
ttgtggtttttgcctttgggcggcacgggtgaaattggcatgaacctgaatttatacggt
catgatggtgcctggttaatggtggattgtggcattactttcgatgctaaaattgatgat
caacaggcacacaaatttgatattgtggccgcagatccgagctttatcagcaaacgcaaa
gagcagctttgcggtattgtgatcagccacgcccacgaagatcatatcggtgcccttgcg
cgcttatggcggcgctttaaagctgacgtctacaccacaccctttaccgcagaaatactg
cggcgcaaatttcagcgagagggagaaaagcgcccgccagtgatccacgaagtcaccgaa
tatgaaattcatcacataggtccatttgaggtgcaatggcatcccatgaatcactcactg
cctgagccatttggtctttctctgaaaacccaggccggcagtgtcttccacagcgcagac
tggaaactggataacaagccagtgctgggcaaaccactaaaccccaatgccttaaaacga
ctgaccagatacaacttcctggcgacagtgtgtgattccaccaatgccttaaaacccggt
tattcgctgtcggagcacgactgctacgaaggactcaaggctcatatcgctcaggcccaa
ggccgggtggcagtggcttgttttagtaccaatattgcgcgactgatttcactggcccgt
atcgccaatgaaacggggcgctactttgccctgttgggcagagcattggaaaacacagtg
gcggtggcacgactcaccggccattggcctgaagatctcactattcaggatcccaacact
gtcggttatttaccgcccgatgaggtactggtagcggttaccggcagtcagggagaggag
cgagcggtactaaatcgcatggctgatggctactataggcaaatagacctggacaaaggg
gacacggtaatattcagttcggtcattattcccgataacgaactcaaaatagagcgtctg
gttaataagcttaaagcccacaatattgcggtggtgcaagccgaaaccagtaatattcct
gtgcatgcctcaggtcatcccaacgaagaagaattgcgccacttttacaaagctttgcaa
ccacagattgccattcctactcatggtgaagctgcccacatggagcgcaacgcccaaatt
gctaaggaatgtcatgtaccaacacaattaacggggttcaatggcgacctgtttaaaatc
gctcctgaggcacaagtaataaaaggatttgctcccgttggcaggatccccttggctgag
taa

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