Pecten maximus (king scallop): 117315494
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Entry
117315494 CDS
T07399
Name
(RefSeq) LOW QUALITY PROTEIN: cartilage intermediate layer protein 2-like
KO
K24436
cartilage intermediate layer protein
Organism
pmax
Pecten maximus (king scallop)
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pmax04990
]
117315494
Domain-containing proteins not elsewhere classified [BR:
pmax04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
117315494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_1
TSP1_spondin
TSP1_ADAMTS
CILP_5th
Ig_3
Ig_2
TSP1_CFP_C
I-set
CILP
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
117315494
NCBI-ProteinID:
XP_033725596
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All DBs
Position
17:complement(13608727..13667052)
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AA seq
1457 aa
AA seq
DB search
MDGIVALKYRPFSADKEFTNLQRQGSDVFEVVVKPVSSPNRLKIYVIVGTVVVIIGIIAA
VVVATTLSATNAAAVNKQNPQLQGTGNDLPSSTTTNDGRVETTADPTATSQTSRQTSVYG
VWTTWAGWTACDVTCGGGTRSRTRVCQKASSSDLDCIGSSSESQTCSTWRCPVYGVWTTW
AGWTACDVTCGGGTRSRTRVCQKASSSDLDCIGSSSESQTCNTRSCPVYGVWTTWAGWTA
CDVTCGGGTRSRTRVCQKASSSDLDCIGSSSESQTCNTRSCPVYGVWTTWAGWRACDVTC
GGGTRSRTRVCQKASSSDLDCIGSSSESQTCNTRSCPVYGVWTTWAGWTACDVTCGGGTR
SRTRVCQQASSSDLDCIGSSSESQTCSTWSCPGDDLTSFPTTNDGRVETTADPTARSQTS
RQTSVEPTADVTSRLVTTTQTTKSNWIWNNWGAWTSCGATCGTGYHTRYRTCLRATNSDP
ICQGEYVQTTTCSLPTCPVYGVWTTWAGWKACDVTCGGGTRSRTRVCQKTSSSDLDCVGS
SSHSETCNTWICPDCSQTCTTGSLNADCTACECTSNTVQGLVRNHANVPLKEASIAHASV
PYKRLATTNETGGFILETTCDAVEIVITRSGYADVTVTVTGNTVKVQMSLIVYPAISMDP
RSRVRVQGENVTFCCEAYGNPAISSYEWMKDGVLIDDSKYPDGFNLTLNDVTTSDSGEYK
CRANSPVGAVYSSPALLSVKAIQSEFCEDAYEERKISLPSDCVQADSTTLYEVGGCAKKT
CRGDSNEDGLCGPSKKFCCLPSSEEERTVQCSGYTLKVLIITGCSCGQCSSGDITIQGQA
NGLNSGIALRLGTVYVNGSSVARTTFSGLFSFTVPAGTLHVAITLEDTLLQHSTDNYKTD
NIRRVYGRYCVPENNVTGSCNSSKYFSNVENTISMGNNSGMPAVAEVIIPPNSFVDAYGN
PYNGVVKASVNMFDPRNLSSISVAPGSFEFTDAEGETQNLQTFGVIVMEFNDESGNKLNG
AGNVTVNLDSTLVESTYSGNVIDVKLWGLSEVTGRWEEVGSMAVDTSKRRRRQTAANYIV
GTLPISAYRAINLDCYAGFRRCYYNMVVTDTNNNPVNGYTVRIIHMTYPGERYSGSTSKY
VTAVKEIASSSRYAHHTFCRKDSWGYIQAYKGDIKYSPGNSSSSGLSSSAISRLDYQTTA
DPISIKSKFLLSSDGPFYYSSNSLSSPATQNHFRFYERHTSFSEFTLFDEAPLDAHSMSL
SGKDHGPMLWYPYKFAERMEDFKICMIKILAIGQTSGLSFSVKSKAGMNSGIKDTILGVR
QVAVENGGACVEYKCSGVYPLFKSMTTNGPRMQNDKTKITITPLGRLCTVSWEGDIKHLN
ENSGSSNVGSVSHEWVIPETEEHGIYIYEQSGKYQDFMGGKARSIVLDMCKAGKNDPPNT
LNPPLNSDGPALRYTCI
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atggatggcatcgtggccctgaaataccggcctttcagtgccgataaggagtttacaaac
ttacagagacaaggctctgacgtttttgaggtcgtcgttaagccggtgtcctctccgaat
cgtctgaagatttatgtcattgttggaactgttgtcgtaatcataggtattattgcagca
gtagtggtcgccacaacgctgagcgcaacgaatgcggctgcagtaaacaaacagaatcca
caactacaaggcacaggtaatgatcttcccagctctaccactacaaacgatggtcgagtg
gaaactacagctgaccctacggcaacatcacagacaagtagacaaacaagtgtgtacgga
gtatggacaacatgggcgggttggacagcttgtgatgtcacgtgtggcggtggtactcga
tcaaggacaagagtttgtcaaaaggcatcatcttcagatcttgattgtataggaagctcg
tcagagtctcagacttgtagcacatggcgttgcccagtgtacggagtatggacaacatgg
gcgggttggacagcttgtgatgtcacgtgtggcggtggtactcgatcaaggacaagagtt
tgtcaaaaggcatcatcttcagatcttgattgtataggaagctcgtcagagtctcagact
tgtaacacacggagttgcccagtgtacggagtatggacaacatgggcgggttggacagct
tgtgatgtcacgtgtggcggtggtactcgatcaaggacaagagtttgtcaaaaggcatca
tcatcagatcttgattgtataggaagctcgtcagagtctcagacttgtaacacacggagt
tgcccagtgtacggagtatggacaacatgggcgggttggagagcttgtgatgtcacgtgt
ggcggtggtactcgatcaaggacaagagtttgtcaaaaggcatcatcttcagatcttgat
tgtataggaagctcgtcagagtctcagacttgtaacacacggagttgcccagtgtacgga
gtatggacaacatgggcgggttggacagcttgtgatgtcacgtgtggcggtggtactcga
tcaagaacaagagtttgtcaacaggcatcatcttcagatcttgattgtataggaagctcg
tcagagtctcagacttgtagcacatggagttgcccaggcgatgatcttaccagttttccg
actacaaacgatggtcgagtagaaactacagctgaccctacggcaagatcacagacaagt
agacaaacaagtgtagaaccaacagctgacgtcacgtccagattggtgacaactacacaa
actacaaaatctaattggatctggaataactggggagcctggacctcctgtggagccact
tgtggaaccggataccacaccagatataggacatgtcttcgagcaacaaatagtgatcca
atctgtcagggcgaatatgtgcagacaacaacgtgttccttgccaacttgtccagtgtac
ggagtatggaccacatgggctggttggaaagcatgtgatgtcacgtgtggcggtggtact
cgatcgaggacaagagtttgtcaaaagacatcatcttcagatcttgattgtgtaggaagc
tcgtcacactctgagacttgtaacacgtggatttgcccagattgttcccagacctgtaca
actggttccctaaacgccgactgtacggcttgtgagtgtacatcaaacactgtacaaggc
cttgtgcgtaaccatgctaacgtccctttaaaagaggcttcaatcgcacatgcgagtgtt
ccatacaagaggttagcgacaaccaatgaaactggtgggtttatattggaaacaacatgt
gacgctgtagaaatcgtcattaccaggagtggatacgctgacgtcactgttacagttaca
ggaaacactgtcaaggtccagatgtcactcatagtgtatccagccatcagtatggatcca
aggtcacgtgtccgtgtccagggagaaaatgtcacgttctgctgtgaagcttacggaaat
cctgccatctccagttacgagtggatgaaggatggtgttttaatagacgattcaaagtac
ccagatggctttaacctgacactaaatgatgttactacaagcgacagtggcgagtacaaa
tgtcgagctaacagtccagtgggggcggtgtactcttcacctgctctactgtcagtaaaa
gcaatacaatcggagttttgcgaggacgcgtacgaggaaaggaagataagtctgccatct
gactgtgtgcaggctgacagcacaactctgtatgaagttggaggatgcgccaaaaagaca
tgtcggggtgactctaatgaagacggcttatgtggtcctagtaaaaagttctgctgctta
ccttcgtccgaggaagaacggaccgtccagtgcagtggctataccctgaaagtactcatt
ataacgggatgttcctgtggccaatgttcatctggtgacatcacgatacaaggacaagcc
aacggcctcaacagtggtatcgcgttgcgtcttggtacagtctacgtcaatggctcgtct
gttgccaggacaacattttccggtttgttttcgttcactgtacccgctggcactttacac
gttgcgataactcttgaagacactttacttcaacactctactgacaactacaaaactgat
aacattaggcgagtctatggaaggtattgtgtaccagaaaataacgttactggaagctgc
aactccagtaagtatttctctaatgtcgaaaatacaatttcgatgggaaacaatagcggt
atgccggctgtagcagaggtcattataccaccaaactcattcgtggacgcgtatggtaac
ccgtacaatggtgtagtgaaggcaagtgtcaacatgtttgatcctagaaacttgagcagt
atttcagtcgcgcctggatcatttgagtttactgatgcggaaggtgaaacacaaaacctc
caaacctttggggttatcgtaatggaattcaacgatgaatcaggaaacaagctgaacggt
gctggaaatgtgactgtaaatctagattctacacttgttgaaagcacgtattcgggaaat
gttatagatgtgaagctatggggtttaagcgaggtgactggtcgatgggaagaagtggga
tctatggccgtggatacatcaaaacggcggaggaggcaaactgcagcgaactacattgta
ggaactctccctatcagcgcatacagggctatcaacttagactgttatgccgggtttcgg
agatgttattacaacatggtagtcacagatacaaataataacccagtgaacggttacact
gtgcgaatcatacatatgacgtatccgggggaacggtattcaggcagcacgtccaagtac
gtcacagcggtcaaagaaatcgcgagcagcagcagatacgcccaccatacattttgccga
aaggactcttggggttatatacaagcttataaaggggatatcaaatatagccctggcaat
tccagttcaagtgggttatcatcgtccgctatttctcgcttggattatcagacaactgca
gacccgatcagcatcaaatcgaagttcttgttatcatctgacggcccgttttattactcg
agtaattccctgtcctcaccggcgacacaaaaccactttcgcttctatgaacgtcatact
tcgttttcagaatttacactttttgatgaggcccctcttgatgcacattcgatgtctttg
tctggcaaagatcacgggccaatgttatggtatccatacaaatttgccgagcgaatggaa
gacttcaaaatctgcatgataaaaattcttgcaattggacaaacatcaggactttctttt
tcagttaaaagtaaggctggcatgaatagcggaataaaggatacaatcctcggagttcgt
caggtcgccgtggagaacgggggagcttgcgtcgaatacaaatgtagcggtgtatatcct
ttattcaaaagtatgacgactaatggacctcgtatgcagaatgataaaacaaagatcacg
ataactccactaggtagattgtgcacggtgtcatgggagggtgacatcaaacatttaaat
gaaaattcaggatcaagtaacgtaggaagtgtatcccatgaatgggttatacctgaaact
gaagagcatggtatctatatatatgaacaaagtggaaaatatcaagatttcatggggggt
aaggcaaggtctattgtccttgacatgtgtaaagcaggaaaaaatgatccaccaaataca
ttgaatccgcccctgaattcagatggccctgcgctcaggtacacgtgtatataa
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integrated database retrieval system
