Pecten maximus (king scallop): 117315533
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Entry
117315533 CDS
T07399
Name
(RefSeq) neogenin-like isoform X1
KO
K06766
neogenin
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117315533
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmax04515
]
117315533
Cell adhesion molecules [BR:
pmax04515
]
Immunoglobulin superfamily
DCC/UNC5 family
117315533
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_2
Neogenin_C
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
ig
V-set
Interfer-bind
C2-set_2
NDNF
C2-set
TM_ErbB1
Mid2
Motif
Other DBs
NCBI-GeneID:
117315533
NCBI-ProteinID:
XP_033725653
LinkDB
All DBs
Position
17:complement(30218567..30487854)
Genome browser
AA seq
1550 aa
AA seq
DB search
MAPWSRERRPELIQGFASLVCLLVLTSAKGDSSMFSDVRFTTEPSDVIVNRGEAAIFNCG
VQCSTTTPAVRWLKDGKPVNMDSGRYTIKANGSLLITSVQHSRTAPRISDKGVYQCIASV
ENVGQIVSRKAQLDIAHLSKTFDIQPHDMTLYLSDVAMFRCEIDGAPPPNITWFKDGNPL
QDRNNIRIFTDGVLEINPVEFRDFGSYHCVAENLDKIKARSSRTARLRQNADIDEILQGI
QPSFVMRPKNTWAEVGTTVILFCGANGQAKEGRQPTISWLKNGITIDFTQTQGRLTVVGA
GSLQIYQVREEDSGTFTCRAENPIDSEDADATLTVQVPPMFRDQPVNHVAQVNSDALFLC
DIYGVPMPETRWLKNGQLVKELNESDYFQIVDNKHLRILGLLKKDEGIYQCFGENSLGSI
QRSAQLLVVDLMVSPPTPSSFTRPIHHLGGIYGDQTRLPSEPREMRAAIVSRRFVTLSWS
RPRSTGEGGEITQLIYSVYWKELGSERERVMNTTQLGANIQHLKPNTAYEFRLRTYNDYG
PSPTFARISITTEKDVDVPSPPTNVEVTALSSMSIHIQWDPPVQAKGTITKYVVISYEVG
KDSGENRVEVLATSYLLENLKSFQEYSFRVFASNEIGDGTSSKEYTCRTFSAKPSDTPKN
VSVETSSSESIIVRWEPPPADSQNGVITGYKIKFKKRGDSRPAKTVTTDGNRRLYALTDL
MKDTEYQVRISALTVNGSGPYVRWHRATTYRDDLDETRVPPPPRLIRVVPYDTSIRVSWS
APDPESKILVRGYILGYGKGVPDSFRLTLDADNHVYTIENLQPASLYVMTVLAFNNIGDG
EPKYQTALTSEETVTEQVTPMMPPVGLKAIVLSSSTVVLTWADTSLGKSQTVTDSRYYTV
RYTSLPNNNKRYKTLNSTDLNAHIDNLKPNTRYEFSVKVIKGRRQSTWSMSEINITQESA
PSSVPRDLTPVPKEDNPTAVTMNWQPPQKPNGQITGYLLFYTTDQSQSDREWVVEGVLGE
KLSTTVKGLTPDTTYYFKIQARNSKGYGPMSSTIIYKTPAKDGTGGGKISPDFIAPEINY
NPNGKDIDEQPQEDDNKQNDAGGLSTNVVIIIVTCVVGASFCIVIIVVAIVLCQKRDNGE
RNKRPQAAQQQSPSKGKMAQRDLKKPDLWIDHQQQFELKNVDKPERSESMLTMSTLRRNS
VDGNKSIDDLPPYHPDIDKEYPEITYHPHGNHEDRYTPMRQQPMQHPPPGLIRPKATKPP
MMIGVDTQQPSHREPIAMVTALQSSQMGQMDSPHGMMPHSRPGFPRTQYNMPYTTSPRVN
TDHSHNMHGMPMDHNYHVSALDDDESSVNDPLLDESYNARVGYGLMSPDICPKQSHSLPH
LAGHGINPNGGSGSHPLPPGVLSHTPHKGQPTAIISPDQQLPGECEEHKSLPRSLHRHPL
RSFSVPSPPPPGSNPLSSVALTPKHQIVKPQQTSSPYKKPTPPISSVPIKPRTTMPIIST
PKAPDVVLKGTQEDPDLQKSVSTEELTAEMANLDCLMKDLNAITQQDFEC
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atggccccctggtcgagggaaagacggccggagctgatacaaggatttgcgagtctcgtc
tgtttacttgtactaacttcagcgaaaggtgactcgtcaatgttcagcgatgtccgtttc
acgacagagccgagcgatgtcatcgttaaccggggtgaggctgctatctttaactgtggc
gtccaatgcagcacgacgacgccggccgtccgatggctgaaggatggtaaaccggtcaac
atggacagtggcaggtacaccatcaaagccaacgggtctttattgattacgagtgtgcag
cattcgcgtactgcaccaaggatatcagataagggcgtctaccagtgcatcgcctcagtg
gagaatgttggtcaaatcgtcagtcgtaaggcacagctagatattgcacatttatcaaaa
acattcgacattcaacctcatgatatgactttatatctaagtgatgtagccatgttccgg
tgtgaaatagatggggccccgccccctaatattacgtggtttaaggatggcaatccacta
caagatagaaataatattagaatatttactgatggtgttttagagattaatcctgtagaa
tttcgagactttggatcgtatcattgtgtcgcggaaaatttagataaaattaaagcaaga
tcaagtcggacagcaagattaagacagaatgcagatatagatgaaatactacagggaata
cagccatcatttgtaatgcgacctaagaatacgtgggcggaggtcgggaccacagtcatc
ctcttctgtggagccaacggacaagcaaaggaggggagacaacccactatatcgtggctt
aagaatggaatcaccatagattttacgcagacacaaggcagactaacagttgtcggggca
ggaagtttacagatataccaggtacgagaggaggactcgggcacatttacatgtcgggca
gagaatcccatagactcggaggatgctgacgcaactcttactgtacaagttcccccaatg
ttccgggaccaaccagtaaaccatgtagctcaggttaattctgacgcccttttcctctgc
gacatttacggcgtaccaatgccggagacacgatggttaaaaaacggacagttggtgaaa
gagctcaatgaatcggactactttcaaatcgtggataacaaacatcttaggattttgggg
ttgctgaagaaagacgaggggatttatcagtgttttggagaaaactctctgggcagcatt
cagagaagtgctcaacttctagttgttgatctaatggtctcccctcccaccccttcttcc
ttcacacggcctatacatcatttaggcggtatctacggtgaccagacacgccttccctcg
gagccacgagaaatgagagcagccattgtttcacggagatttgtgacgttatcctggagc
agacctcggtctacaggagaaggaggggagataacccagctgatctactctgtatactgg
aaagaattggggtctgaaagagagcgggtcatgaacaccacacaattaggagccaatatt
caacaccttaaacctaacacagcctacgagttccgactcagaacctacaacgattacgga
cccagcccaaccttcgcccggatatccatcacaacggagaaggacgttgatgtcccaagc
ccccctacaaacgttgaagtgactgcgctgtcttccatgtcgattcatatccaatgggat
cctcctgtccaggccaagggcactataactaaatatgtggtcatctcgtacgaagttggc
aaggacagtggtgaaaaccgagtagaagtgctggccacctcatacttactggaaaatcta
aagagtttccaagagtacagcttccgggttttcgcaagtaacgagattggagatggaacg
agttccaaagagtacacatgtcggactttctctgccaaacccagcgacacgccaaaaaat
gtctctgtagaaacttcaagttccgagagtataattgtgagatgggagccaccacctgcc
gattcccaaaacggtgtcatcactggatacaaaatcaaattcaagaaacgcggtgacagt
cgtcctgcaaaaactgtgacaacagacggaaaccgacgtctctatgcccttacagatctg
atgaaagataccgaataccaggtgagaatttcggcactcacagtcaacgggagcggcccc
tacgttcgctggcatagggcgacaacttaccgagatgaccttgatgagacgcgagtcccg
ccccctccaaggctgatacgcgtggtgccgtacgatacgtccattcgagtgtcgtggtct
gccccagatcccgaatctaagattttggtgcgcggctacatactggggtatggtaaggga
gtacctgactcgttcaggttgacgttagatgcagacaaccacgtttacactatcgaaaat
ctccaaccagcatcactgtatgttatgacggtgttagcattcaacaacataggcgacggg
gaacccaagtatcagaccgccctcactagtgaggagacagtgacagaacaagttactcca
atgatgcctcctgtgggtttgaaagcaattgtgttatcatcgtcgacagttgtactgacg
tgggccgacacatcactgggcaaatcgcaaactgtcactgatagtcggtactacacggtt
cgatacacatcactacccaataacaacaagcgttacaagaccctcaactcgaccgacctc
aatgctcacatcgataacctcaagccaaacacacgctatgagttctctgtcaaggtcatc
aaaggtcgtcgtcagagcacatggagtatgagtgaaattaacatcacacaagaatcagca
ccctcttctgtacctagagatctgacacctgtccccaaggaagataatcccacagctgtt
acaatgaactggcagcctccccagaaacctaatggacagattacaggctacctgttgttc
tatacgactgaccagagccagagtgaccgtgagtgggtagtggagggagtactaggagag
aaactgtccaccacggtcaaaggtctcacaccagacaccacctactacttcaagatacag
gcgaggaatagtaaaggttatggacccatgtcaagtaccatcatctacaaaactccggca
aaggatggtactggtggaggaaagatcagcccagactttattgcaccagagattaattac
aacccgaacgggaaagatatagatgaacagccacaagaggatgataacaagcagaacgac
gctggcggcctgtccacgaatgtcgtcatcatcatcgtaacatgtgtcgtgggcgcatcc
ttctgtatcgtcatcattgtcgtggctattgtattgtgtcagaaaagggacaacggagaa
cgcaacaaacgccctcaagccgcccagcaacagtctcccagtaaaggcaagatggcccag
cgtgacctaaagaagcctgatctctggatcgatcatcagcaacagtttgagctaaaaaat
gtcgataaaccggaaaggagcgaatctatgttgacgatgagcacacttcgaaggaattcc
gtggatggaaataaatctattgatgatttaccgccatatcatccagatattgacaaagaa
taccctgaaattacctaccatccccacggtaaccatgaggataggtacacacctatgaga
caacagcccatgcagcacccacccccagggctgatccggcccaaagctacaaaaccaccg
atgatgatcggcgtcgatacacagcagccctcacaccgagaacccatcgccatggtgaca
gctctacagagcagccagatgggccagatggactcgccacatggtatgatgccacactcg
cggccaggcttcccgaggactcagtacaacatgccatatacaacgtcaccacgtgttaac
acagaccattctcataatatgcatgggatgccaatggatcataactatcatgtgtcggcc
ctggatgacgacgagtcgagcgtcaacgatccgctcttagacgagtcctacaacgctcga
gttggatatggccttatgtcgcccgatatctgccccaagcagagccatagtctaccccat
ctggctgggcatgggatcaaccccaatggagggtcggggtctcatcccctcccccctggg
gtgttatcccataccccccacaagggtcagccgactgccataatctcgcctgaccaacag
ctgcctggcgagtgcgaggaacataaaagtttaccccgatcccttcaccgacacccgctg
cggagcttttccgtgcccagtcccccgccccctggcagtaatcccctgtccagtgttgcc
ctcaccccaaaacaccaaatagtgaagcctcagcagacatcaagtccgtacaagaaacca
acgccacctatatccagtgtccccattaaaccccgtacaacgatgcctatcattagcacc
ccaaaggcaccggatgtggtgctgaaaggaactcaagaggaccccgatcttcagaagtcg
gttagtacagaagagttgacagcggagatggccaatctcgactgtctgatgaaagactta
aacgccatcacacagcaggacttcgagtgctag
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