Pecten maximus (king scallop): 117316388
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Entry
117316388 CDS
T07399
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax04140
Autophagy - animal
pmax04142
Lysosome biogenesis
pmax04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
117316388
04140 Autophagy - animal
117316388
04148 Efferocytosis
117316388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmax04131
]
117316388
Membrane trafficking [BR:
pmax04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
117316388
Hops complex
117316388
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
VPS18_solenoid_2nd
Beta-prop_WDR36-Utp21_1st
zf-C3HC4_2
Beta-prop_EML
Beta-prop_WDR3_1st
zf-RING_2
Beta-prop_VPS8
Beta-prop_IFT140_1st
TPR_GEMI5
CNH
zf-C3H2C3
Beta-prop_EML_2
zf_RING_Vps8_fungal
ASA1
zf-rbx1
zf-C3HC4
DUF7914
zf-RING_5
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
117316388
NCBI-ProteinID:
XP_033726820
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All DBs
Position
18:complement(3168359..3212782)
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AA seq
923 aa
AA seq
DB search
MALLQWRRFNFFDKETVKDPDTGQVFDKLKDVNVSACVSGHGQLIIGDHEGFLYLVSRQL
KLSVFKAYEIRVSHLFQLRQHNLLVSVGEDEQGVNPLIKVWNLDKIEKGTPVCTRITRAI
PGNKPTPVTCLAVHENLAWMAVGFENGSVVLFKGDVTKDRHTKTRIVYENPKPVTGLAFK
TSGSKTIFLFVVTESQVVSISISGKQDQKSTVEHFGASLHCTVMSDHTQDHQLVMGRQDA
VYFYQPDGRGPCLAFEGEKLHLQWFRGYLIVVGKENKALLRTTVLGGQSLEMNIVTVYDI
QNKFIAYSAPYPDVIGVMCEWGSVYLLGGDRKLYQLQEKDTQTKLEMLFKKNNYQLAISL
AKSQQYDDDGLIDIFTQYGDHLYSKGDHDGAIDQYIRTIGKLEASYVIRKFLDAQRIHNL
TKYLQALHKAQRATEEHTTLLLNCYTKLKDVSKLDEFIMTKDREVDFDVETAIRVCRQAS
YYTHALFLAEKHAKHHWYLRIQLEDSKNYQQALEYIGKLEFEEAEENLKKYGKVLMSEVP
RQTTELLKRLCTDYRPADKPLVDQMNIDGGVARIQKASAEEFIHIFVNNSPKLTEFLEHM
IKVKPNSPSLLYNTLLELYLHEYVHERDSSVKTEKVRRTEDLLKNPDARYDLDQALVLCQ
MNNFKAGILYLYEKAHLYQQILQYHMEHDDYVHVIDTCKKFGGQDSNLWVQALSYFARKE
DNCKSQLMEVLSHIDKKNLLPPLLVIQSLAHNSTATLSVVKDYIIRRLQLENDQIAEDER
LIKQYREDTEKKRAQIEEMKTTAKIFQASKCNICNHPLELPSVHFLCEPHSYHQHCFENY
AENDSECPVCAPENRKIMDIIRAQEQSKDLHEFFHNQLERSQDGFSVVADYFGRGVFNKV
TIITDSPTRQRGAATANYPSKHL
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggctcttctacagtggagaagatttaatttttttgataaggaaactgtgaaggacccg
gatacaggtcaagtgtttgataaactcaaggatgtgaatgtgtcagcctgtgtgagcggt
catggccagttgattatcggtgaccatgagggatttctgtacctggtcagcaggcagctc
aaactcagtgtattcaaggcatacgagatcagagtgtcgcacctcttccagctccgccaa
cacaatcttctggtgtcagtcggggaagatgagcaaggcgtcaacccacttatcaaggtg
tggaatttggacaagattgagaaaggaacaccagtttgtaccaggataacaagggctatt
ccaggaaataaacccacccctgtgacttgtctggctgtccacgagaacctggcctggatg
gcagtcggatttgaaaacggtagcgtggtgcttttcaagggggacgtcactaaagacaga
cacaccaaaaccagaattgtctatgagaatccgaagcctgtcactggattagcattcaag
acatcgggatctaaaacaatattcttgttcgtggttacagaatctcaggttgtttccata
tcaatctccggcaaacaagaccagaagagtacggttgaacatttcggggcatcccttcat
tgtaccgtgatgagcgaccacacccaggatcaccagctagtgatgggcagacaggatgca
gtttatttttaccagccagacggacgggggccctgcctggcttttgagggtgaaaagcta
catctccaatggtttaggggctaccttatagtagtaggcaaggaaaacaaggcactcctt
cgtactactgtactgggaggacaaagcctggagatgaacattgtcactgtgtatgatatc
cagaataaatttatagcgtattccgcgccgtatcccgacgtgataggagtcatgtgtgaa
tggggaagtgtatacctgctgggcggggatagaaagctctaccaactccaggaaaaagac
acacagaccaaactagaaatgttgtttaagaaaaacaattatcagttggctatcagcctt
gctaagagccaacagtacgatgatgatggtttgatcgacatctttactcaatatggcgac
cacttatacagcaaaggcgaccatgacggagcaatcgaccagtacatccggacaatcggc
aagctggaggcttcctatgtcataagaaagtttctagacgcccagagaatccacaatctg
accaagtaccttcaggcattacacaaggcccagcgggctactgaggaacacacaacactt
ctcctcaactgttacaccaaactaaaggatgtcagtaaactcgacgagttcatcatgacg
aaggacagggaagtggactttgatgtagagacggccattcgtgtgtgtagacaggccagc
tactacacccatgctctgttcctggccgagaaacacgccaaacaccactggtacctccga
atacagttagaggacagcaaaaactaccaacaggccctcgagtacatcggcaaactcgaa
tttgaggaggctgaagaaaacctgaagaagtacggaaaggtgctgatgtcagaggttccc
cgccagacaaccgaactcctcaaacgtctatgtacagactacagaccagcagataagcct
ctggtggatcagatgaatatagatggaggggttgctagaatacagaaagcaagcgcggag
gagtttatccatattttcgtcaataactcaccaaagctaactgaattcctggagcacatg
attaaggtgaagccgaattctcccagtctactgtacaacactttactggagctgtacctc
cacgaatatgtgcacgagagggatagctctgtgaaaacagagaaggtgagaaggactgag
gacctcctaaagaatccagacgcccgttacgaccttgaccaggctctggttctatgtcag
atgaacaatttcaaggctggcatactttacctgtatgagaaggcccatctctatcagcag
attctacagtaccatatggagcatgatgattatgtacatgtaatagatacatgtaagaag
tttgggggacaggattctaacttgtgggtacaggcgctgtcgtattttgccaggaaagaa
gacaactgtaaatcccagctgatggaggttctctcacatattgacaaaaagaatctatta
cctcccttgttggtaattcaaagtctggcacataactctacagcaaccctgtctgtggtc
aaggattacattatcagacgactgcagttggaaaatgatcaaatcgccgaggatgaacgt
cttattaaacagtacagggaggacacagagaaaaaacgtgcacagatcgaggaaatgaaa
actacagcaaaaatattccaggcctccaaatgtaatatatgtaatcatccactggaactg
ccgtctgtacatttcctgtgtgaacctcactcctaccatcaacactgttttgagaattat
gcggagaatgactctgaatgcccagtttgtgcaccagaaaacagaaagatcatggatatc
ataagagcacaagaacagagcaaagacctacacgagttctttcataatcagttggaaaga
tcccaagatggcttttctgtagtggcggattactttggacgaggagttttcaacaaggtg
acaattattacagactcccctaccaggcaaagaggagcagcaacagctaactatccctcg
aaacacttgtaa
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