Pecten maximus (king scallop): 117316672
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Entry
117316672 CDS
T07399
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein-like
KO
K12857
Prp8 binding protein
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117316672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmax03041
]
117316672
Spliceosome [BR:
pmax03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
117316672
Complex C
U5 SnRNP specific factors
117316672
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_RIG_2nd
eIF2A
WD40_RFWD3
Ge1_WD40
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
WD_LRWD1
PEP5_VPS11_N
Cytochrom_D1
Nbas_N
WDR54
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
117316672
NCBI-ProteinID:
XP_033727268
LinkDB
All DBs
Position
18:complement(19085033..19097360)
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AA seq
347 aa
AA seq
DB search
MDYKRKLTEGALVPSKKPRNDMIVDLTHQESNALLQTGPPRVSNLEAPIMLLTGHEGDIF
TTKFSPDGQLLASSGFDRLIYFWLVYGECENIAVLKGHTGAVMELQFSTDGNTVFTAATD
KTIALWDVEVGERIKKCKGHQSFVNSVNVARRGPQLVCSGSDDGTIKLWDSRKRGELQTF
QSTYQVTACTFNDTAEQIISGGIDNDIKVWDLRKNDMLYRLRGHADTVTGMELSPDGSYL
LSNSMDNTVRVWDIRPFAPQERCVKVLQGHQHTFEKNLLRCAWSPDGSKVSAGSGDRYVY
VWDTTSRRILYKLPGHAGSVNEVDFHPTEPIIASCSSDKKIYIGEIE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggattacaaaagaaagctcactgagggggccctggtgccgagtaaaaagccaagaaat
gatatgattgttgatttaacacatcaagagagcaatgccttgctacagacgggcccacct
agagtttctaaccttgaggcccccatcatgttactgactggccatgaaggtgatatattc
accaccaagttttctccagacggacaacttctcgcctcctctggatttgacaggttgatt
tatttctggcttgtgtatggagaatgtgaaaatattgcagtcctcaagggccacacaggg
gcagtaatggagcttcagttctccacagatggaaacacagtatttacggctgccacagac
aagactattgcattatgggatgtagaggttggtgagcgcatcaagaagtgcaaaggtcac
cagagttttgtaaattcagtaaacgttgccagacgaggtccccaactagtctgtagtgga
agcgatgatggcacaatcaagttatgggactccagaaagcgtggagagttacagaccttt
cagagtacataccaagttacagcgtgtaccttcaatgatacagccgagcaaatcatctcg
ggaggtatcgacaatgacattaaggtgtgggacctaaggaagaatgatatgctctaccga
ctacgaggacatgctgatactgtgacggggatggagctgagtcctgacggatcctacctt
ctctccaactctatggataacacagtgagagtttgggacatccgacccttcgccccacag
gagagatgtgtgaaagtattacaaggacatcaacatacatttgaaaagaatctcctgagg
tgtgcgtggtccccggatggaagtaaagtctcggcagggtcaggtgatcgttatgtgtac
gtctgggatacgacatcacgccgcatcctctacaagctccctggtcatgcaggatccgtg
aatgaagtggatttccacccaacagaacctatcattgcatcgtgttcgagcgacaagaag
atatacataggagagatagaataa
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