Pecten maximus (king scallop): 117317094
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Entry
117317094 CDS
T07399
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03030
DNA replication
pmax03410
Base excision repair
pmax03420
Nucleotide excision repair
pmax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117317094
03410 Base excision repair
117317094
03420 Nucleotide excision repair
117317094
03430 Mismatch repair
117317094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmax03032
]
117317094
03400 DNA repair and recombination proteins [BR:
pmax03400
]
117317094
DNA replication proteins [BR:
pmax03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117317094
DNA repair and recombination proteins [BR:
pmax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117317094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
PTCB-BRCT
BRCT_2
AAA_16
nSTAND3
AAA_30
AAA_14
RuvB_N
Rad17
AAA_33
AAA_5
Motif
Other DBs
NCBI-GeneID:
117317094
NCBI-ProteinID:
XP_033727774
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All DBs
Position
18:complement(27438007..27468436)
Genome browser
AA seq
1119 aa
AA seq
DB search
MDIRSFFTSGSVKKTNNASNKDKPEPPKLNVKGKLDKSSKRNGKDVSKSAEKGKGSDKKS
KETKGHDLSKGSKGKAKKVIVLDSDDEDVNGNVKKPEKQKESEHSSKTRRKRQVSSEEEK
EDTVSGHRKTGKKAHIIESDSDEEPIPRKTSKSQNDKKKTGIMFMDDSDEEPAKKSTLDS
FVKTPSPQKVKSKTETKKSETKTPVNVSDFFGSSSVQRSDRKTLASKRKIDEDDEAHDDD
DFEKTLAQLDNVQKSKKPRLSSETSPNKCASTSTSISTSTPSPSGKLSSKLAAKAKEHKE
SSRVKEERNILVPETPEPKQISKKASPVMVSPKKLTSPHKDASPKKLSPFKSEKAYTPKV
SPGKPPNTSPPKSGSTKTSPDVPDLASRTSYRSYLTREGPRSLGAKEMPEGAENCLEGLT
FVLTGVAESFDRDDLKRMVEKYGGKVTTTVSKKTNYLVAGRDSGESKLQKARGFGTVILD
EDGLLELIRTKPGKKSKYEIQAEESAIKENSKTPTRKRGSVSKLAEFERRTSTSSPSSSS
PVKKTVDGKDEPVLMWVDKYKPVGLKQLIGQQGDKSNAKKLLHWLTNWHKNDAAGVKPQG
KFFGKDDGAGTKAALLSGPPGIGKTTTATLVCKEAGFSFVELNASDTRSKKSLQHEVAEA
LGNETLLDYMGPGRPKSHGKKHCLLMDEVDGMAGNEDRGGLQELVSLIKGTKIPVICMCN
DRNHQKMRTLSNYCFDLRFQRPRVEQIKAAMMSIAYKEGLKIPPPALNEMILAANHDVRQ
VIHNMSMWTAGNKSLTYDQAKEDSNRARKDMKLGPFDVCRKVFVGGDETANMSLIDKSDL
FFHDYSLSPLFVQENYINVVPYAARGNAARHLSLLARTAHSITDGDLVDKAIRSRMAWNL
LPTQAMYSSVIPGELMRGSFPQMVSFPTWLGQNSSRGKTERILQETRTHMRLRISGDKRS
LNMDYLPYMRHSLTRPLVTRENEGVPEVIHLMGEYDIIKEDFDNILEVSKWPNSDDPFKH
LSTKTKSAFTRTYNKEVHMTPYSTGVLTKKKRGGGGSVAGPEEGEEEGNMSESDDDKDDL
QKDTMIKQAKKKPAAASKEKSKETSSKGKGKGKSSKKRS
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggatattcgtagcttttttacaagtggcagtgtgaagaaaactaataatgcaagcaac
aaagacaagccagaacctccaaagttgaatgtgaagggaaaattggataaaagttctaaa
agaaatggaaaagacgtgagcaagtccgcagagaaaggaaaagggagtgataaaaagagt
aaagaaacaaaggggcatgatctgagcaaaggaagcaaaggaaaggcaaagaaggtgatc
gtcttagacagtgacgatgaggatgtaaatggaaatgtgaaaaaacctgaaaaacagaaa
gaatctgagcatagctcaaagacaagaaggaagcgtcaggtgagcagtgaggaggaaaaa
gaggacacagtttctggtcacaggaaaaccggcaaaaaggcacacattattgaatcagat
tcagatgaagaacctattccaaggaaaacgtctaagagccagaatgacaaaaaaaagact
ggcattatgtttatggatgattcagatgaggaaccagcgaagaagtcaaccttggattcc
tttgtgaagacgccaagtccgcagaaagtcaaatccaagactgaaaccaaaaagtctgag
acaaaaactccagtgaatgtatctgacttctttgggagcagttctgtacagcgatccgac
agaaaaactttggcctccaaacgcaaaatagatgaagatgacgaggctcatgacgatgat
gattttgagaaaactcttgcacaattggacaatgtccaaaagagcaaaaagccgcggtta
tcaagtgagacgtctccaaacaagtgcgccagtacctcaaccagtatctccaccagtacc
ccaagtccatctggaaaattgtcgagcaagttggcagctaaagcaaaagaacataaggaa
tcatccagagtaaaggaagaaaggaatatcctagtgccagagacaccggaaccgaaacag
atttcaaagaaagccagtcctgttatggtgtctcccaagaagttgacttcacctcacaag
gatgctagtcctaagaagttatcaccatttaagagtgagaaagcttatacccctaaagtc
tctccagggaaaccaccgaatacaagccctccaaagtctgggagtaccaaaacatcccca
gatgtaccagacttggcgagtagaacatcttatcggtcgtatctaacaagggaaggacca
aggtcattgggtgctaaggaaatgccagagggtgcagaaaactgcttggaaggtttaaca
tttgttttgactggtgtggccgagtcatttgaccgtgatgacctcaagcgtatggtggag
aagtatggtggcaaggtgaccaccacagtcagcaagaaaacaaactacctggttgccggg
agagacagcggagaaagtaaactccagaaggccaggggctttggtactgttattttggat
gaagatggccttctggaacttattagaacaaaacctggaaagaaatctaaatatgaaata
caggccgaggaatctgccatcaaggaaaattcgaaaacaccaactcgaaagagaggatca
gtaagtaaacttgccgagtttgaaagaaggacctccacatcaagtccgtcatctagctct
ccagtcaagaagacagttgatggaaaagatgagcctgtgttgatgtgggtcgataagtac
aagccagtgggactgaagcagttaattggacaacagggggataagagtaatgcaaagaaa
cttctccactggctcacgaactggcacaaaaacgacgcagcaggagtcaaacctcaggga
aagttttttgggaaggatgatggtgctgggacgaaggcagccttactgtctggtcctccg
gggatagggaagactaccacagccactcttgtgtgtaaggaagctggcttctcctttgtt
gagttaaatgcgtctgacacacgttcaaagaaaagtctacaacatgaggtcgcagaggct
ttgggcaatgagacacttttagattacatggggcctggccgtccgaagtcacatggaaag
aagcattgtttgttgatggacgaggtagatggaatggctggcaatgaagatcgtgggggg
ttacaggaactggtgagtctcatcaagggaaccaagatccccgtcatctgtatgtgtaac
gacagaaaccatcagaagatgaggacactctcaaactactgcttcgaccttcgctttcag
agacctcgagtagagcagattaaggcagctatgatgtcgatagcctataaagaaggcttg
aagattccaccacctgcacttaacgagatgatcttggccgcaaatcatgacgtgcgtcag
gtcatacacaacatgtccatgtggacagccggcaacaagtcactaacgtacgaccaggcg
aaggaagactctaatcgtgctcgcaaagacatgaaactgggacccttcgatgtgtgtcgc
aaggtatttgtgggtggagatgaaactgcaaacatgagtttgattgacaaatctgacctg
tttttccacgattacagtttgagtccattgtttgtgcaagaaaactacataaatgttgtg
ccgtatgctgcaagaggaaatgcagcaagacatctgtccctcttggctcgtacagcccac
agcatcacagatggagatctagtcgacaaagccatcagatcacgtatggcatggaacctc
ctcccaactcaggctatgtattccagtgtgattcctggggaattaatgcggggtagcttc
cctcaaatggtctctttcccaacgtggctcggacaaaactcatcccggggtaaaacagag
aggattcttcaggaaacccgcacacacatgagacttaggatctctggtgacaagcgtagt
ctcaatatggattacctcccttacatgcgacactctctaacacgtcccttggtgacacgg
gaaaatgagggtgtaccagaggttatacatctaatgggggagtatgacatcatcaaagaa
gattttgataatatcctggaggtatcaaagtggccgaacagtgacgatccctttaaacat
ctctcaaccaagaccaagtcagccttcacaagaacatacaacaaagaggttcacatgacg
ccctactccactggggtcctcaccaagaagaaacgtggaggtggagggtctgtggccggc
cctgaggaaggtgaagaggaagggaatatgtcggagagcgatgatgataaggatgacctg
cagaaggatacaatgattaagcaagcaaaaaagaagccagcagctgctagcaaagagaaa
tccaaggaaacatcttctaagggtaaaggtaaaggcaagtccagtaagaaacgttcctag
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