KEGG   Pecten maximus (king scallop): 117317823
Entry
117317823         CDS       T07399                                 
Name
(RefSeq) ras-related protein Rab-5C-like
  KO
K07888  Ras-related protein Rab-5B
Organism
pmax  Pecten maximus (king scallop)
Pathway
pmax04137  Mitophagy - animal
pmax04144  Endocytosis
pmax04145  Phagosome
pmax04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:pmax00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117317823
   04145 Phagosome
    117317823
   04137 Mitophagy - animal
    117317823
   04148 Efferocytosis
    117317823
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pmax04131]
    117317823
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmax04147]
    117317823
   04031 GTP-binding proteins [BR:pmax04031]
    117317823
Membrane trafficking [BR:pmax04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    117317823
 Endosome - Lysosome transport
    117317823
Exosome [BR:pmax04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117317823
  Exosomal proteins of other body fluids (saliva and urine)
   117317823
  Exosomal proteins of colorectal cancer cells
   117317823
  Exosomal proteins of melanoma cells
   117317823
GTP-binding proteins [BR:pmax04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    117317823
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase MCR_beta AAA_16
Other DBs
NCBI-GeneID: 117317823
NCBI-ProteinID: XP_033728659
LinkDB
Position
19:complement(12484699..12501496)
AA seq 214 aa
MANRAGAQRPNGATQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKTWVKELQR
QASPNIVIALAGNKSDLSNKRMVEYEEAQAYAEENSLLFMETSAKTAMNVNDIFLAIAKK
LPKNEGGGAAQPRQQGMKINNSETSQTSEGGCCK
NT seq 645 nt   +upstreamnt  +downstreamnt
atggccaaccgtgctggtgcacagagacccaatggggccacccaggggaaaatttgtcaa
ttcaaacttgttttgctcggagaatccgctgtgggaaaatcaagtttggtgttacgattt
gtgaagggacaatttcacgagtatcaagaaagtacaattggagctgcatttctaacacag
acagtgtgtttagatgacacaacagtgaagtttgaaatctgggacacagccggccaggag
cgctatcacagtttggcacccatgtattacagaggagcacaggctgctattgttgtgtat
gatataacaaaccaagacacatttggaagagcaaagacctgggtgaaagaactacaaaga
caagccagtccgaatattgtgatagctcttgctggcaataagtctgatctctcaaataaa
cgaatggttgaatatgaggaagcccaagcgtatgcagaagaaaacagtttgctgttcatg
gagacatctgctaagactgccatgaatgtgaatgatatttttttggcgatagccaagaaa
ttaccgaaaaatgaaggcggcggagcagcacaaccacgtcaacaaggcatgaagattaat
aatagcgaaacgagtcaaacgtcagaaggtggatgctgcaagtaa

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